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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14847_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		protein_suppressor_of_white_apricot_isoform_X1_[Bombyx_mori]
Ontology
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:3.65 TPM:3.93
ORF EntryO_BomoOtmSK13988_complete:A_BomoOtmSK_comp14847_c0_seq1
Sequence
(Nucleotide)
CTCAATGACAGTATGACAGCGTTGTGTCCATTATTGTTGAAATGCTCACGGAAAATTATC
AAAAATGGCATCAAAATGGACTAGACGTCGTAGTGAAGCCGGTATATTAAGAAAGAATGA
AATCAATGAGAAAAAAGAAGAGTTACTCGTGTTCGGCTATTCATGCAAAATATTCAGGGA
CGATGACAAAGCTTTGTTCATTGACCAAGGGAAACACCTCATTCCGTGGATGGGGGATGA
AACGTTGAAAATCGACAGGTTCGATCCGTTTTTTACTATCAGACTGCTAACTGTGGTGCT
AAAACCATAAAAAACGATAATAATTTGTCAGAATGTAATAAAATTTTGGAAGACTTATAA
GATTTTCGCAGAGGATGATGAGTAAAGCCTACAGCGGGACGGGACTTAGACAGGGGCGCG
GGCCCGTCGTGGTGACGTCTTTTCTTATGGTGACACTCTCCGGTGGTATGTATAACTTAC
AACGGAATAATTGAGTATGTATAAAAATGTAATCTAATTGTTTCACATGCGAATGATGTT
ACCATAGTTTATTATTAAAATTTTGATTATGGTTACGTTGTATATGCTGTTTATAGTATT
AAAAACGAAGTGTATTTAGTATAAATCTACAGTTGAAATAATTTATGTAATTTACTGGTA
ACAATGAAACTTCCAATGGATGTACTGAAAGCTAAAATGTCATTCAACATAGGAAATAAA
GTTTGGATATTAAAAACCTCACATTATTTGCAGGTCTAATGACAAGATAGTTCATGGATT
ATCATGCTATTTATGTGAACAGGTATGATGCAAGAGGAGCCCTACACGATGTGTCAGCAT
TGGAAGCCCCGCCGGGAGGATACGACTGGCGGGTGGAGTTAACAAAATCTGAGCTTGATG
TGGAGCAACTATGCGATGATGAACGTTACCGAGCTCTATACACAAATGAAGATGAAGAAG
AAATGTACAAAGAGGAAGAACTGAAGCGTCTCCATGCGGCTGGTTACGGACAAGTTGGTT
TCAATTATGATACATTAGCTCCACCTAAGCCACCCGTGAAGCCAGTTGAGGTAGATGAAC
CATTTGTTCCGTCTTCAACTCTTGAAACTCTGCTACCTGAAGATATTGTTTTACCTGAGA
CACAAAAACTGAATGCCATCATAGAGAAGACAGCCAACTTTATAGCAAGTCAGGGTGTCC
AGATGGAGATCCTCATCAAAGCCAAGCAGGGTGACAATCCTCAGTTCCAGTTCCTCAACA
AAGACTCACCTTTGCACCCATATTATAGTGCGCTCATCGCACTCATCAAAGCCGGTAAAT
GGCCTGAGAAGAAAGTCGATTCTGTTGAAGAACGACCACCTGACAATGATGAATATCTCC
ATCCAAGCTTAGCATCAACCATAATTGAATCTGCTCCATCGATTCCGAGCATCCAATACA
AGCCATCAGCGGACTGCGACTACACGATGCTGGTGTCCAGTCTGGTGGGGCCGCCGCCCG
AGGAGCCTTGTCCCGGGGAGGAGCCCCCGCCTGGGACCGAAGTTTCCGCTCCGCATCCCC
ACATTTCTAAGGAACCCGTCATGTATAACACGCAAGGAACATCGGATCCAAGGCTACAAG
CAGCACAGACAACGTACTACCAGCAGTACGCAGCGTACTACCACCAGTACATGGCGCAGG
CTGAAGCACAAGCACGTGCGGAACAAAAAAAAGAAATCATCGTAACCAAATCTACTGGAC
TTAGTCTCATGAAGAACTATAACTCTGATTCCGGGTCCGACGATACTGATTCCGAAGATT
CTTCGTCATCGGACAGTAAAGATCAAATAATATTGACGCCCCCGGAAGACGTTCAGACGG
TGATCGACAAGATGGCCGCCTACGTTGCACGAAATGGCGACGAGTTCGCCGACATAGTGC
GTTCGAAAAACGATCCCAGGTTCACGTTCCTGGAGCCCGATCACGAACATCATCCGTATT
ATAAAAGATTACTGCAGCAGAAGAAAGGCGTCGACGTGAATGGAAAGAAAAAGGACAAGA
AGAATTCTTTGCCTGTTTCTTTTTCTATAAAGAAATTGAAAGAGCCCGATCCTATTTTGC
CGAAACCGGCTCTGCCTTACGAGTCGAGTACGGACGACGAGAACGAGGAGAAGCAAACGG
AGAATCAGGAACACATCGAGCCAAAGGATCACACCAAATTAGTCGCTCAGACTCCAAGTG
TCCTGCCGCCTATAGTAGTGTACAAGATGGACGGGTTGATCCACGATTTCCCCGTCGTCA
GAACGATCGAGCCGGTCAAGCCGACATCCCAAACAAGCCCACCGAAGCTCACGCCAGTCA
TACACGAAGTAAAAGAAATACCTAAAATAGATCCTCCCGGTCTCGTAGAGAAGCCACAAC
TCGTCGGACCGGTAACTAATACTTACGTCAAGGAAAACACGCATAAAACAAGAGAAGATA
ACTCGGAACGAAGAAAAGAGAGAAAGAAAGATCGCAAGAAAGAATACAAGTCGAAATCTA
GGAGTAGAAGTAGTAAGCGAAGAAGTCCGGTGAGGAATTCCGTGAAAGAGAAAAAACGGG
AAAAAGATGAGAAAGTTAGTAGTAGTAAGAAGAGTGAACCGGTCAAGGAAAACTTTGAGA
CCGAAATTATTTCGCTAGAAGACAACGGAGATGATTTGATTGATCTCACCGGCGATCAGT
CCGACAGTAAACTGGAGGGCGAGGCGGAGCACGGGCGGGAGAGGCAGCGGGAGCGGCGGC
GGCGCGCGGCCGAGTTCCTCAAGAAGGTGGGCGTGGACCCTGGGGCCGCCGCGCTGCCCA
CCTCCTCGCTGGCCAGCGCCATGGTTGATACGTTGGAGTCTTTGAAACGTAAGAAAGCGG
AAGAAGAAGAAAAAAGACGGAGAAGAGAAAAGAGAAGACATCGAGAAAGATATTACGACG
ATGAGTCTCAAAAAATGCATCATAAAAGCAAAAGAAGAAGGCGCAGATCGTCTGAAAGCG
AAGACGCCGATAACGATGGCTCGAAAAAGAAGAAGCGCAAGAAGGAAAAGAAACACGCCT
CGAAAAGCAAGAAGAAGAGGAGAAAAGAGGACGAGGACAGTGAGCAGAGGTTGCCGGACA
TTGACCTCACGCACACCCTCAAGGAGCTGCGGACCAACTCTCCGACCAAAGACTTGGTGC
TTCAGAACTTGGAAGTGAACACGACCGCCAGACGGAACTCCGACGAGGACGTAGCTAAGA
ATAGAAAGAGAAAGAAAGACAGAGAGTACAGCGAGGGCGAGTGGTCCAGCGATAGTGAGG
AAGATTCAAAGTCTTCGGAGAGTCAGCACGGATAATATTAAGTTTTATTTTTTGTATCCG
CTGAAGATAACAATGATTGTCATTGTATTGTAATTATTATTAGCTCTGTGAGCTTAGAAG
CAACGATTCGCTTAGTTACTAGGCAGTGTGATTGTTCAAAATGATAATATCAAGGGATAA
AAGGTTTAATTGGTTTAAGCTTAATACGCGACATTTATTTTTGTAATTAAAATTTTGTTG
TAAAACATTAAATTTTATTATTGATGGGCGAGTCCCGCCATGTTGCGCG
(3589 bp)

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