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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14828_c1_seq6
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		potassium/sodium_hyperpolarization-activated_cyclic_nucleotide-gated_channel_2_isoform_X6_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0002027 P regulation of heart rate
GO:0003254 P regulation of membrane depolarization
GO:0005216 F ion channel activity
GO:0005222 F intracellular cAMP-activated cation channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005248 F voltage-gated sodium channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005272 F sodium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0006936 P muscle contraction
GO:0008015 P blood circulation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030552 F cAMP binding
GO:0031226 C intrinsic component of plasma membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0042391 P regulation of membrane potential
GO:0042802 F identical protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0055085 P transmembrane transport
GO:0055117 P regulation of cardiac muscle contraction
GO:0060078 P regulation of postsynaptic membrane potential
GO:0071320 P cellular response to cAMP
GO:0071321 P cellular response to cGMP
GO:0071805 P potassium ion transmembrane transport
GO:0086015 P SA node cell action potential
GO:0086091 P regulation of heart rate by cardiac conduction
Transcript
Level		FPKM:1.80 TPM:1.94
ORF EntryO_BomoOtmSK13933_complete:A_BomoOtmSK_comp14828_c1_seq6
Sequence
(Nucleotide)
AGCGAGTGCGTTATAAGCTATTGTGAAGCTCGGCGCGTGCATTTCGGGGCGTCGTGGTTA
GTGTATCTCGTCGGGACCCTGCCACCACCAGCCGGCGCATTCGACAGTGCTATGAGCGTC
GACCAGTCGCGCTCAATTCTCGTCGGCACATCGCCGCCCGTGCCGTTCTATAATTTCAAA
AATGACATTCTTAGTTCACTGATTTGACGAAAACGTTCGCCATGTGCTGTGCAAGGTACA
CGAGCTACCTCTTCCGTCGCGTTGTTAAGTACACATGTGAACTAGCCGGCCGCGAAAGCG
ACGCCGATATGTCGCTGAAGCAGGGCAGCGGCACCGGCAAAGTACACTTCGGTGGCCTGG
ACGATGTGTCCTTGTACGGAACGCCAGTGGAACCAGCACCGCCGGCGCCGGACGCAAAGC
AGGGCTTCCTGCGGAACCAGTTGCAAGCCCTCTTCCAGCCCACCGACAACAAACTCGCGA
TGAAACTATTCGGCTCAAAGAAGGCACTTATGAAGGAGCGCATCAGACAGAAGGCGGCGG
GACATTGGGTCATCCATCCGTGCAGTAGTTTCAGATTTTACTGGGACTTATGCATGCTGC
TACTTCTTGTGGCGAATTTAATCATCCTACCAGTTGCCATCTCCTTCTTCAATGATGACC
TTAGCACGCGCTGGATCGCCTTCAACTGTCTGTCCGATACCATATTTCTAATAGATATCG
TTGTTAATTTTAGAACAGGAATAATGCAACAAGATAATGCAGAGCAAGTAATACTAGATC
CAAAGTTAATAGCGAAACACTATTTGAGGACTTGGTTCTTCCTGGACCTCATCTCTAGTA
TACCACTAGATTATATATTTTTGATCTTCAATCAGGTAAACGATTTCAGTGAAAACTTTC
AAATACTACATGCGGGTCGCGCGCTGAGGATACTCCGATTAGCAAAGCTGCTGTCATTAG
TCCGGCTGCTCCGTCTCTCCAGGCTCGTCCGATATGTCTCACAATGGGAGGAAGTATATT
TTCTCAACATGGCTTCCGTGTTCATGCGGATATTCAACTTAATATGTATGATGCTGTTGA
TCGGCCATTGGTCCGGATGTCTACAGTTCCTGGTTCCTATGCTGCAAGGATTTCCACCAA
ACTCGTGGGTTGCTATAAACGAGTTACAGGAGGCTTTTTGGTTAGAACAATATTCATGGG
CGCTGTTCAAGGCAATGTCACATATGTTGTGCATCGGTTACGGACGGTTCCCTCCTCAAT
CACTCACCGACATGTGGCTCACGATGCTCTCGATGATATCAGGAGCCACTTGCTACGCGC
TCTTCCTAGGTCACGCAACCAATCTCATCCAGAGTCTCGACTCTTCACGCAGGCAATACC
GTGAAAAGGTGAAACAAGTAGAAGAGTACATGGCGTATCGCAAATTACCACGTGAAATGC
GTCAACGTATCACCGAGTACTTCGAACACAGATACCAAGGGAAATTCTTCGATGAGGAAG
TAATTTTGGGCGAGCTGAGCGAAAAACTGCGGGAAGATGTCATCAACTACAACTGTCGCT
CACTTGTGGCCTCTGTACCTTTCTTTGCAAACGCCGATTCCAACTTTGTATCAGATGTCG
TCACCAAACTACGCTATGAAGTATTTCAGCCCGGTGACATTATCATAAAGGAAGGAACAA
TAGGGAATAAAATGTATTTCATCCAAGAAGGCATCGTAGATATAGTCATGGCCAACGGTG
AAGTTGCCACCAGTCTATCTGACGGTTCGTACTTCGGAGAAATCTGCCTGCTAACAAACG
CTCGCAGAGTAGCATCCGTCCGCGCTGAGACGTACTGCAATCTGTTCTCTTTGTCGGTGG
ATCATTTCAACGCCGTGCTAGACCAGTATCCGTTGATGCGACGCACGATGGAAAGTGTCG
CAGCCGAACGACTGAACAAGATCGGCAAAAACCCGAATCTGGTGGCGCACCGCGAAGACG
ACACGACATCCGAAGGGAACACGATCAACGCAGTGGTTAACGCTCTCGCGGCAGAAGCAG
AGCACGTAAGTCTGTCAGACGACAGTGTGGCACGACTGTCGGAGAGGTCGCTGGGGCTAG
CACTGCAACCACTGCAGGCGGCATCGTGTCGCATGGCAGGTGTGGCCCTACCGGGGCTGG
GCGTAGCGGCTGCGCTGCCGCGTCCCAAGTCGGAGCACGACTTCAGTTCGACGCAGGCTC
AGCCGCCGTCGTTGTCGTCGGTCGGAGCCGCCTTCCACAAATCGGACGCGGGCATCGCAC
CCTGACGCCGCACGCTCTGCTAGGCCTGCCGCGGCACGCCGCGACGCGACGCGACGCTCC
CGACACTAGGCTTAGTGCGAGGGCCGCTCGCTAGTTGTAGCGTAGACTCGACTCTAGTAG
CTGCGACTTCGCCGGCCGCCCGCCGCGCGCGACGCCCCTTGAATCTCATTTTGTGATCTT
ATACTTAATTCTCCTGTGTTATAATTTAGGTTAAATTTTATATCATTGACGCTGTGAGGA
ATCGATGAATACGTGACGTATTCCGATTGTATAGATATAAATGTATACCTGTTGTGTATT
GAAAAAAACGATTACTATTAAATCTTTATAGGGAGATCTTTATAGATACCTTGCCATTAT
TAAAAGAAAGAATAATGATTTAGACTAGACTGAAATTTAAAAATATCAATATTTTATGCT
ACATGTAATGACGTTTGAAATTGATCTTTGTTGATACGGGGTATTCGATGGCGAAACGGT
GGGATATAAGTGCATAGTAATAAATCAACGTGCCTGAATAACACGGTTCAGAGACTTTAT
ATTGTTCCATCGATTTTCGTTCCATTATTTTATTTTACTGTGTAACAGTGTTATTGAATC
GTTGCGGAGTACGTGGGGAGGTGACATTTGTGACGCATTCTCGCCTAAAAATTATGATTT
ATAACTAAGTTAACTTGTTTCGATTATCAGTTAAGCTTTCAATTGCGGACTAAAGAGAAA
AGGAACAGCAGCCTTCTAATATTCTTCTAACGTTAAACACAAGAATTACAAGGAAACATT
CCTTAGTATATATCTAATTGCGCCTCACAAAAATCTCACGCTGTACAAGTGACGCACAAG
TTAATTCTCACATACGATTCAAATAGCATACGTTGCTTTGTTTAACTTTAATTATAAGTA
GTTATATTCACCGATATAAAAGGGCATAATTAGCGCCAGCATTAATATCTCGGTTTCCTA
AGTAGAGGTGATATAGTTAGAGCTTCGGAAGTTTCGAGAATTATTTCTGATGTAAATATA
TTTTATTGTGAGTTTGCGCGTTTATGCGGTTCGATAAATTTACGTAAGTCTAGGGGGCGT
TCGGTCGAGCGGTTCAGTCAATTAATCCGTGCTCTCGCGGCGCGAGACGGACGTCTCTTA
TCTCAATGCACCACTAAACTTCATAATTTCATTTTAATTGTAGGCGAAAATAATTTATTG
TCGATAGTGATCATTTAGTAGTAATAAGTAGGCCAAAGCGTTAACAAATTCGGACGAATT
ACGTATGTGATAGTGGGAATGCTAAAGCTGCACGCGCTTCGGCCGTACTCTCCGCGACCG
ACATTAGCGTAGCTCGAATGCATGCAACACGTGCTTCAGGACACCGGAAATTAGTTTCAC
GTTCCATTACTCCAACTATACGCGTTCGATTCACTCGGAACTGGAACGATTGCTTATCAA
TATGGCTTGCCTGTATTCACACCACTGTAGACACTTATATAATTAGGGGAATAGTTTTAA
TGAGCGACATATCCTAGTGAAGCTCGGGAATAGGGTCGCGGAGCGGACGTCCCGAAACGC
GAAATCATCATCGTTGATTAATACTTAGTGTCATGACAAATTTGTAAATGACGATTTTGC
GAATGTTGAACTTTAGCCAAAATATAGTTAATGAATGAAGAACCAATATGCATTAGCTTT
CTTTGTAGAAAAACGCAGCCTAGTTCAGATCGACAATTAACACCAATAGATACTTTATAT
ACTCATAAGATTTATATATTGATCATAGCAGAACGATTATCTGTCAATTTATCTACAAAG
AGAATAACAAAATATTATTGCGTTTCATTCCCAGAGGCATTTATTTATTGTTATTTTATC
AATCTAACATTAATGCTTTTATAAATTATATAAATTTTATAGAAGAAATCTATTTTTGAT
TGTGAAGTTAAACTAATGATTGTATGAAAGAGAATCTATTACTATATCAAAAAAG
(4255 bp)

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