SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14828_c1_seq2
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		potassium/sodium_hyperpolarization-activated_cyclic_nucleotide-gated_channel_2_isoform_X6_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0002027 P regulation of heart rate
GO:0003254 P regulation of membrane depolarization
GO:0005216 F ion channel activity
GO:0005222 F intracellular cAMP-activated cation channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005248 F voltage-gated sodium channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005272 F sodium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0006936 P muscle contraction
GO:0008015 P blood circulation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030552 F cAMP binding
GO:0031226 C intrinsic component of plasma membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0042391 P regulation of membrane potential
GO:0042802 F identical protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0055085 P transmembrane transport
GO:0055117 P regulation of cardiac muscle contraction
GO:0060078 P regulation of postsynaptic membrane potential
GO:0071320 P cellular response to cAMP
GO:0071321 P cellular response to cGMP
GO:0071805 P potassium ion transmembrane transport
GO:0086015 P SA node cell action potential
GO:0086091 P regulation of heart rate by cardiac conduction
Transcript
Level		FPKM:3.48 TPM:3.75
ORF EntryO_BomoOtmSK13928_complete:A_BomoOtmSK_comp14828_c1_seq2
Sequence
(Nucleotide)
TGCACGCGCTGGGTCGCACGGCCGGCATGCTGGCCTCGCAGCGCTCGCAATCCTGCAACG
AAGAGGGCGCGTTCTTCGGAGCGCGTGCGTTGCGCCGGCCGCGAGGCAAAGGCAGTGGAA
GTCCAACCTGCTAGGGGTACGCCATGTCGCTGCGCAGCCTGCACCGGCGGCTTTCGTCCG
CAAACAACACATGTGATGATGGTGGAGGCGGCGCGGCGACAGGTACCGGGGGTCGGGCAG
CGTCGTTGCGGCTCGCGAACGGGCGGGTCGCGGCGCAATCGGCGGAGCAGCTGCCCCACT
CGCCGGCGGATTGCGCTTCGGTGCGCATTTCCATCGACAACACCAACACCTGCTGCACCG
ACTCGCTCGTCACCGCACTCGACGACGAGACGTTACTGTTAGGCGACGCCGATATGTCGC
TGAAGCAGGGCAGCGGCACCGGCAAAGTACACTTCGGTGGCCTGGACGATGTGTCCTTGT
ACGGAACGCCAGTGGAACCAGCACCGCCGGCGCCGGACGCAAAGCAGGGCTTCCTGCGGA
ACCAGTTGCAAGCCCTCTTCCAGCCCACCGACAACAAACTCGCGATGAAACTATTCGGCT
CAAAGAAGGCACTTATGAAGGAGCGCATCAGACAGAAGGCGGCGGGACATTGGGTCATCC
ATCCGTGCAGTAGTTTCAGATTTTACTGGGACTTATGCATGCTGCTACTTCTTGTGGCGA
ATTTAATCATCCTACCAGTTGCCATCTCCTTCTTCAATGATGACCTTAGCACGCGCTGGA
TCGCCTTCAACTGTCTGTCCGATACCATATTTCTAATAGATATCGTTGTTAATTTTAGAA
CAGGAATAATGCAACAAGATAATGCAGAGCAAGTAATACTAGATCCAAAGTTAATAGCGA
AACACTATTTGAGGACTTGGTTCTTCCTGGACCTCATCTCTAGTATACCACTAGATTATA
TATTTTTGATCTTCAATCAGGTAAACGATTTCAGTGAAAACTTTCAAATACTACATGCGG
GTCGCGCGCTGAGGATACTCCGATTAGCAAAGCTGCTGTCATTAGTCCGGCTGCTCCGTC
TCTCCAGGCTCGTCCGATATGTCTCACAATGGGAGGAAGTATATTTTCTCAACATGGCTT
CCGTGTTCATGCGGATATTCAACTTAATATGTATGATGCTGTTGATCGGCCATTGGTCCG
GATGTCTACAGTTCCTGGTTCCTATGCTGCAAGGATTTCCACCAAACTCGTGGGTTGCTA
TAAACGAGTTACAGGAGGCTTTTTGGTTAGAACAATATTCATGGGCGCTGTTCAAGGCAA
TGTCACATATGTTGTGCATCGGTTACGGACGGTTCCCTCCTCAATCACTCACCGACATGT
GGCTCACGATGCTCTCGATGATATCAGGAGCCACTTGCTACGCGCTCTTCCTAGGTCACG
CAACCAATCTCATCCAGAGTCTCGACTCTTCACGCAGGCAATACCGTGAAAAGGTGAAAC
AAGTAGAAGAGTACATGGCGTATCGCAAATTACCACGTGAAATGCGTCAACGTATCACCG
AGTACTTCGAACACAGATACCAAGGGAAATTCTTCGATGAGGAAGTAATTTTGGGCGAGC
TGAGCGAAAAACTGCGGGAAGATGTCATCAACTACAACTGTCGCTCACTTGTGGCCTCTG
TACCTTTCTTTGCAAACGCCGATTCCAACTTTGTATCAGATGTCGTCACCAAACTACGCT
ATGAAGTATTTCAGCCCGGTGACATTATCATAAAGGAAGGAACAATAGGGAATAAAATGT
ATTTCATCCAAGAAGGCATCGTAGATATAGTCATGGCCAACGGTGAAGTTGCCACCAGTC
TATCTGACGGTTCGTACTTCGGAGAAATCTGCCTGCTAACAAACGCTCGCAGAGTAGCAT
CCGTCCGCGCTGAGACGTACTGCAATCTGTTCTCTTTGTCGGTGGATCATTTCAACGCCG
TGCTAGACCAGTATCCGTTGATGCGACGCACGATGGAAAGTGTCGCAGCCGAACGACTGA
ACAAGATCGGCAAAAACCCGAATCTGGTGGCGCACCGCGAAGACGACACGACATCCGAAG
GGAACACGATCAACGCAGTGGTTAACGCTCTCGCGGCAGAAGCAGAGCACGTAAGTCTGT
CAGACGACAGTGTGGCACGACTGTCGGAGAGGTCGCTGGGGCTAGCACTGCAACCACTGC
AGGCGGCATCGTGTCGCATGGCAGGTGTGGCCCTACCGGGGCTGGGCGTAGCGGCTGCGC
TGCCGCGTCCCAAGTCGGAGCACGACTTCAGTTCGACGCAGGCTCAGCCGCCGTCGTTGT
CGTCGGTCGGAGCCGCCTTCCACAAATCGGACGCGGGCATCGCACCCTGACGCCGCACGC
TCTGCTAGGCCTGCCGCGGCACGCCGCGACGCGACGCGACGCTCCCGACACTAGGCTTAG
TGCGAGGGCCGCTCGCTAGTTGTAGCGTAGACTCGACTCTAGTAGCTGCGACTTCGCCGG
CCGCCCGCCGCGCGCGACGCCCCTTGAATCTCATTTTGTGATCTTATACTTAATTCTCCT
GTGTTATAATTTAGGTTAAATTTTATATCATTGACGCTGTGAGGAATCGATGAATACGTG
ACGTATTCCGATTGTATAGATATAAATGTATACCTGTTGTGTATTGAAAAAAACGATTAC
TATTAAATCTTTATAGGGAGATCTTTATAGATACCTTGCCATTATTAAAAGAAAGAATAA
TGATTTAGACTAGACTGAAATTTAAAAATATCAATATTTTATGCTACATGTAATGACGTT
TGAAATTGATCTTTGTTGATACGGGGTATTCGATGGCGAAACGGTGGGATATAAGTGCAT
AGTAATAAATCAACGTGCCTGAATAACACGGTTCAGAGACTTTATATTGTTCCATCGATT
TTCGTTCCATTATTTTATTTTACTGTGTAACAGTGTTATTGAATCGTTGCGGAGTACGTG
GGGAGGTGACATTTGTGACGCATTCTCGCCTAAAAATTATGATTTATAACTAAGTTAACT
TGTTTCGATTATCAGTTAAGCTTTCAATTGCGGACTAAAGAGAAAAGGAACAGCAGCCTT
CTAATATTCTTCTAACGTTAAACACAAGAATTACAAGGAAACATTCCTTAGTATATATCT
AATTGCGCCTCACAAAAATCTCACGCTGTACAAGTGACGCACAAGTTAATTCTCACATAC
GATTCAAATAGCATACGTTGCTTTGTTTAACTTTAATTATAAGTAGTTATATTCACCGAT
ATAAAAGGGCATAATTAGCGCCAGCATTAATATCTCGGTTTCCTAAGTAGAGGTGATATA
GTTAGAGCTTCGGAAGTTTCGAGAATTATTTCTGATGTAAATATATTTTATTGTGAGTTT
GCGCGTTTATGCGGTTCGATAAATTTACGTAAGTCTAGGGGGCGTTCGGTCGAGCGGTTC
AGTCAATTAATCCGTGCTCTCGCGGCGCGAGACGGACGTCTCTTATCTCAATGCACCACT
AAACTTCATAATTTCATTTTAATTGTAGGCGAAAATAATTTATTGTCGATAGTGATCATT
TAGTAGTAATAAGTAGGCCAAAGCGTTAACAAATTCGGACGAATTACGTATGTGATAGTG
GGAATGCTAAAGCTGCACGCGCTTCGGCCGTACTCTCCGCGACCGACATTAGCGTAGCTC
GAATGCATGCAACACGTGCTTCAGGACACCGGAAATTAGTTTCACGTTCCATTACTCCAA
CTATACGCGTTCGATTCACTCGGAACTGGAACGATTGCTTATCAATATGGCTTGCCTGTA
TTCACACCACTGTAGACACTTATATAATTAGGGGAATAGTTTTAATGAGCGACATATCCT
AGTGAAGCTCGGGAATAGGGTCGCGGAGCGGACGTCCCGAAACGCGAAATCATCATCGTT
GATTAATACTTAGTGTCATGACAAATTTGTAAATGACGATTTTGCGAATGTTGAACTTTA
GCCAAAATATAGTTAATGAATGAAGAACCAATATGCATTAGCTTTCTTTGTAGAAAAACG
CAGCCTAGTTCAGATCGACAATTAACACCAATAGATACTTTATATACTCATAAGATTTAT
ATATTGATCATAGCAGAACGATTATCTGTCAATTTATCTACAAAGAGAATAACAAAATAT
TATTGCGTTTCATTCCCAGAGGCATTTATTTATTGTTATTTTATCAATCTAACATTAATG
CTTTTATAAATTATATAAATTTTATAGAAGAAATCTATTTTTGATTGTGAAGTTAAACTA
ATGATTGTATGAAAGAGAATCTATTACTATATCAAAAAAG
(4360 bp)

- SilkBase 1999-2023 -