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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14803_c0_seq2
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		protein_TIS11_isoform_X2_[Bombyx_mori]
Ontology
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0001570 P vasculogenesis
GO:0003342 P proepicardium development
GO:0003677 F DNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006402 P mRNA catabolic process
GO:0006417 P regulation of translation
GO:0006915 P apoptotic process
GO:0007507 P heart development
GO:0008283 P cell population proliferation
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0021915 P neural tube development
GO:0033077 P T cell differentiation in thymus
GO:0035264 P multicellular organism growth
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0060710 P chorio-allantoic fusion
GO:0060712 P spongiotrophoblast layer development
Transcript
Level		FPKM:28.39 TPM:30.60
ORF EntryO_BomoOtmSK13834_complete:A_BomoOtmSK_comp14803_c0_seq2
Sequence
(Nucleotide)
AAATGCAGATGGAAATAAGGAAAACTTACAAGAAAAAAAATGTCATAAACAAGCTTTTAT
CCTTAATTTTGTCCATAAGAAAATATAGAAAACGTAGTCAATTTTATTTGGAAGATTAAC
TTAAAAATTGAAATTAAATTACAAAAAAATTAAATACTTAAATTATAACTGATAATAATA
GGTACTAATCGTTTTAAACTAATGCGGGTTATATTAAATGACTCATGATATATTACAAAA
CATGTTAAGCGCAGTAGTTAAATGTCCGTTTAAATACAAAAGTAATTAAATAAATCAGGT
TTTATGGTTTATAAAAACGTAATGAACTGATAATAAATAATATTCGCGTACTTTATGAAA
TCTTATAACTAATTAGTCACTTAACATTAGGTACAAAATTATTTATCATTTAATGGTGTC
ACAATGCATCGAGACTAACACATGGAGGAAACAGAAACTATGCTCTTACTAAACAAAACA
AAAAAAATACCATCTCGGTCTACGAACTCACAATAATCAAACACGAAGCCAGCTGTGGTA
ATATGTCATTTATTGAAAGTACAAAATCTAGATCTGTTTAATAAAAATACATCAGCGCGG
CGAGGATATGTCTTGGAAATGGTCGGAAGCGTTACGCTGTTCTTATTTAATTTTTTCTTC
AGAATTTCTGCTATTCACCTATTGGTCCCTTACAATAAAAATTAGACTTTGTTATCATAA
ATATTATAAAATATCACACTTTAAATTCAAAGAAAAAAAAAACTATGCTATATATCGAAA
CTATATTTAGTTCGGTCAAGTACAAAAATAATAACTGTGCCAATTTTGAATATATTATTC
AAAGCAGACAATAAATAAACAATCAATCTATCTCGATAAATTAAAAGTTAAATATAATCG
TATTTAGTTTAAAGGCACGATTCGTTTTGTGTGTCGTCGACGGATCTCAGACGTGGAAGC
TCAAGATACGATTGTCGCCTTCGTTCGCGCCGACAACACACGTGTTACGGCTAAAGTTCG
TCAACATTATACACATGCTTTATGTGATATTCTTTCAAGTTTTGCGGTGCACGAGACTTC
CAGAGTTCGGCCGTTCAATTTCAAGGATTGTTGATAGTTTTTTTTTTTAGATACAGACAG
ATACGATTACAGATTTCTATAATGCTCCAGCGCCGACGATGCAAGGGAGTAGCGCTGCGG
AGTGAGTTCGAAAAAACAATCACCTAAACGCCAAACAGGTTTAAGATGACCGCCTCGGCG
GCACGAAAGAAAAAAATCATTCTTTCCAGACAGGTCGAGAGAGGAGAGGAGGCGACGTTA
CGTGCGTTTTGTATTCATAGATATGATTACAGAGGATTTGTGCAGTACTAAAACTTCGCC
ACAGCGATTTAATATTCGGCATTTATTACAGCGGCGGGGAACATTCGTATCAATTCCTTT
TAAGTCACCAAATTTTTTTTAAATGTTGTCAGGCCGAGCTCTCGAGGTAAAGAACATCAA
CTGATTCCGTCCACAGTTCTACAGGACTGAGATTGTTAATTTTTTGGGTCAGAATCAGCC
TCATTGTGTATCAAAACGAGCCACGTCCCAGCGACGCAGGCCTCGTCCGTATGCGGTGTG
GCATCGCAGCAGCTAGCTACAAAATAATTATTAAAGTTAAGAGACTCGAAATAAATAATA
AATTATTATCTTATACACTTAAAAATAGATCACGAGCGCCTTCTCGCGGTACGGTACCGA
GCGCGGACAGGCAGTACGAAATAAATAATGTTCTAAAAGCTAACTTTACAGAGACCACCG
CTCGGCGGAGGATCGCATCGGGAAGACTTCCGCGAGCTAATAAATATCTAATAATAATAA
AGGTGCCATGTACAAGTGCGTGCCGATAACTAAAATTGAACGTAACAAACTAATCACACC
GCAAACTTTCGAGACGCCAGTGAACACTTCGTAAATGTTAAAGATTTATTACTGGTCGAA
AGTATTAACAAAAGACCATCGATAAACATCAGGAGATCATTCGTTGAGCGGGTGTGCAAA
TGCGCGAGGCGCGGCGACCGGGACGTCGCTCGTGCGCGGTCTGGAAGACGTCGAGGAGGC
ACTACGGTGTCGGACGATTCTTATGCTATACTCGGTATAAATTAACTTAGGACTAGTCCA
TCGCACTAAGCGATGACGAGATCGCCGAGAGCCGATGAGAGTCGGTTAAAAACGGGCAGT
CGGTCGTCTTCCGGATCGGGGGAGTTCGTGCGGCGAAAAGCGAAAGCTGTGGCCTGTGCT
GGTGGCGACATCGCAGGTGGAGAGTGAGGCGTCAATGGAGAATGCGGCGAGCGTGGCGAT
CGCGATCCGTCGCTCATATACGACGCCATAGATCCGCCCGATGAGAGCGATGCCAATGAA
CCTCCTGGCGACGATGGTTCTCTGCGTCTTGCTTCCTCTGCGTTATGCACGAAATGGCAA
CGCGGTCCATAAGGACAGAAGCCAACCGAATGGAAAGTGCGACACAGCTCCGTCTTGTAT
TTAGGATGACGCTGAAGATTGCGTAGTTCGCGGACGCCGTGAGCAAATTGGCATTTATCC
CCATATTTACAAACCCCCGCTTCTTCAAACGGTCGGCAGAGCTCGGTCTTGTAGCGACTT
GTGGCTGGTGGCGGAGGAGCCGGTTCACTGGTGGTGCGTTCGAGACGGCGATGACCCAGA
CGGTCTAGGAGACCGGCTAAGGCACGATGCGCTGGTACAGAGGAAGCGCGCGACAGCACT
GGATGCTGCTCCCAGCTTAGACCACTTGAGACTGAGTTAGCACCGATTGGTCCAATTGCA
CCGCCTATGTTCCCATTCATCGTCTGCACTGGTCGAGTTTGATTCTTCAAGAACAGATCA
CCAAAGTCATGCAGGGCAGACTGATGCATTATGGCTGTAGACATCATGTATGCAAAACGA
ACTCGACACTTAATCCAGATTTTATTCTTATTTCTTGATGTTTCTTTGGAAACTGATCCA
CTGTAGCACGAATATATAAGGTCGACGAACTCACTGTGAATTTTAGGTTAGCTGATGAAA
AGTTCACGAAGACTTTTGAAGATGTTTCCAAAATCCTTGCGATTTTATAGTTCAATTACT
GAGGTCGTTGCTTTTTTGTTTATCGTTCGGTGATCAGTTTGATTCCGAACTAGTTGGCCA
AGAGGCGATTTTGTTGCCCCTCCAGATTTAAGCCAAAACAGTAATTTTGAACACAATTTC
GCTATCGCAGCGAAAATGTACAAAACAGTCCTTTGTTTCGAAAAGTTTTTTACAACCTTT
TTTTCGCGTCTATACGGAAACACAAATTTTGGTCAAATTCTGCGCGAACTGCGTCAAAGT
TAACTTCTACAATACAAACTTTTTTGTAGTTATCGACTTTATACTCCAAAAAGTTTTTAT
TCTAGTTGTATAAATCGTAAAATTTCAATAATAAATCGCAGCGTCAACGTCCGCGCAAAA
CGCACCACACGTACATTCCGTATCACGCTTGCTCGCGCACTCAATTCGCATTCTCGCCCT
TCA
(3543 bp)

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