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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14738_c0_seq2
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		ribosome_biogenesis_protein_BOP1_homolog_[Bombyx_mori]
Ontology
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
GO:0043021 F ribonucleoprotein complex binding
Transcript
Level		FPKM:3.54 TPM:3.82
ORF EntryO_BomoOtmSK13600_5prime_partial:A_BomoOtmSK_comp14738_c0_seq2
Sequence
(Nucleotide)
CCGCTGCTCGCCGTGGCCACGCAGCGCGCCGTGCGCCTCTACGACCTGCTCAAGCAGGAG
CTGGTGCGCAAGCTGCGGCCGGGCGCGCAGTGGATTAGCGACTTCGCCTTCCATCCCGCC
GGAGACAACATGCTCGTGGCTTCTTACGACCGGAAGTGCATGTGGTTCGACCTGGAGCTG
TCCCCGCGGCCCTACCAGACGCTGCGGCTGCACGGCGGGGCGGTGCGCGCGCTGGCCTTC
CACCGGCGCTACCCGCTGTTCGCGACGGGCGGCGACGACGCGCACGTGGTGGTGTCGCAC
GGGATGGTCTACAACGATCTCCTGCAGAACCCGCTGATAGTCCCGCTCAAACAAATCCGC
GGCCCAGAAGTCAAGGACGAGCTGTGCGTGCTGGACCTGCGCTTCCACCCCACGCAGCCC
TGGCTGCTCGCCGCCGGTGCAGATTCTACTATCAGACTCTACTCTTGAAACCCAATAAGA
AAAACTTTAGCACACAATATAAATAGCACTATTATTTTGATGGAATGTCCCTTTTCTTAC
ACTGCGGCGGTGGGCGCGCGCACGTCCCGTGACCACCACTGAGTGCAACAAACTGCCACA
TAGACATACATATTATCAATCATCCTACCTATTGTTACTGTAAAACCCTAATACATTGGT
TTACATTTATCTCATATCTCAAAGTGAACTGCAACTTTTACATCATGTTTGTGGGCCTTT
TTGGACTGGGGGCAGAATATTTTAAGGAAAACCCACATTGTGGGGGCACCTTCGAACCTT
GCCCGAGGCAAAGACCATCGGTACCTAGTTGTTGGCTTTCTTAAAAGTCAATTATTACCT
TTATATATAGTTCTGGTGATATAATTAAGAATGATTTAAAATAACAGTTTTTTTTTTATC
TAAATCATATTGATATGTGTATTTATGCAAGTGTTCCTTCTCATATGTAACCAGTTATGT
TATGAAACAG
(970 bp)

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