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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14734_c0_seq2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		transforming_growth_factor_beta-1-induced_transcript_1_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0003713 F transcription coactivator activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0010718 P positive regulation of epithelial to mesenchymal transition
GO:0016055 P Wnt signaling pathway
GO:0016331 P morphogenesis of embryonic epithelium
GO:0016363 C nuclear matrix
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030579 P ubiquitin-dependent SMAD protein catabolic process
GO:0030855 P epithelial cell differentiation
GO:0031012 C extracellular matrix
GO:0045165 P cell fate commitment
GO:0045599 P negative regulation of fat cell differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048495 F Roundabout binding
GO:0050681 F androgen receptor binding
GO:0070411 F I-SMAD binding
Transcript
Level		FPKM:79.00 TPM:85.17
ORF EntryO_BomoOtmSK13590_complete:A_BomoOtmSK_comp14734_c0_seq2
Sequence
(Nucleotide)
TTACGACCAAAACAACCGTACGTGACGAGGGCAGGGTTACGTCACCCCTCGATAACAGAG
CGACGACCACGTATATGGAGCTCGGCTACTGGCGCGGCGCGATCCTTCAGTACGCGACGC
GCCATCGGACAAAACGTACGCGGATTTCAAAATAACACAACACAACACGAAAGTAAAAAA
ATATAAAAACAATCACCGGCACAATCATGTCAACAAAGGTTGAAGCCCCCGCCGTCTGTA
ACAGCTGCGACAAAGTGATTCAAGGCAGAATCGTGACGGCGCTGAACAAGAAATGGCATC
CCGAGCACTTTGTCTGCAACACCTGCCGTAAGCCAATCGATGGAGCCAAGTTCCACCAGC
ACAACAACGGTGTCCATTGCGTGCCCTGCTTCACCAAACATCACAGCCCGCGGTGCCATG
GATGCGGCGACCCCATCACTGACCGTGTGATCCAAGCTCTTGGCGTATCGTGGCACGCTC
ACCACTTCGTCTGCGGTGGATGCAAGAAGGAGCTTGGCGGTGGAGGGTTCATGGAACAGG
CTGGCCGTCCCTATTGCTCCGATTGCTATGCAGACAAGTTCGCCACTCGCTGCAAGGGGT
GCGGAAATCCAATCGTCGATAAAGCCATCATCGCGCTTGACGCTAAGTGGCACCGCGATT
GCTTCACGTGCATGAAGTGCAGGAATCCAGTGACCGATTCGACATTCTCCGTGATGGAAA
ACCAGCCACTCTGCGGTAAATGCGCTTAATTCATCACAAATATATAAATAAAATCCCCCA
TCGAGATGTATAGTAACACTTTTAGAATTGATGTGACATAAATTGTAACTATTTAAATGT
ATAGTGAATTAATGTTGGAATCAATAAAAATATCATGAAATCTGACAGGGCTACCGTAAA
ACATAGCACTGCGCTAGTAACAACATGAAGATTATTTGTAATGTATCACACTAATTGCAC
ATCAACATTAAATAATATATAAAAAAAGAGTTCAGGTAAGCCTAGGTACCTAAAAGTAAT
ATGTCAGATTTTTTAAATTAAATTCACTTGCACTTTCACATGATTATTTACAAGTTATAA
AATCAGCTAATCGGTCTACCTATAACGCTCAGTCCCCATTTTATCGACATCCTTACAGTT
GTTAGCGACAGTTATCAGGGTACGCTAAAGCAAAACTTTTGTGTCACTTTCAATTTTAAA
GATGTGATTAATATATTTTATCTACATATTTTATTATGTCTTAGTTCATAGAAAACTTTT
AAATATCTTTAATTATGATGATTTTCTCTGGAATTTATGTCATTCAATAAACAAACGAAA
AAAAGAATGCACCAAAGATAAATTACTCACGCGCAATAATATTTTGTGTGTAAATAAACT
TTTAGTGTTACGTTATTATTACATTTCAAAGCATATTATTTTTTCGCACTACAGACAATT
AGAAATATGGTTTGTCCTTAAAATCCAAGATAATGAAAAAAAAGGTTTGTGCGAATTGAC
ACCAAATAAACAGGTTCAGTGGAGACGCTAGTGCATTTCACTTACAATTATGTAAACGAT
GTGTCTAATCTTTACTTTCTTAAAGCAATCCGTTAAAAATCCATAAACGTATTATAGTGT
ATCAAAAGAAAAAAAAATACAAACAATTAATTATAAGTTCCAGTACAAAATTGTACTGTT
TTAATGTCAAAGACATAAAATTTTAGAATAAGAAATTGAAAACAATTTAAATATTTGTGA
TTAATAAAGCACGCTGTGATGCTTAATAAGCTTTGGGCTAAATTTTTGTTTTTCGTTTCA
CTTTTTACTAAGCTAAGATTCATTTTGTACGCTTCGATAAAGTTTTTGAAATAAATATAT
TTTTTTGTTCGACAAAAA
(1878 bp)

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