SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14684_c0_seq4
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		serrate_RNA_effector_molecule_homolog_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
Transcript
Level		FPKM:1.83 TPM:1.97
ORF EntryO_BomoOtmSK13480_complete:A_BomoOtmSK_comp14684_c0_seq4
Sequence
(Nucleotide)
CTTTAATTGCCTATGGTGTGCGTGTTAATTTATGCCTTTCGAGGATTTTCTAAAGCTATA
AATGAGTGATTGTTAAAATCTTAATGAATCTATGCATAAAGAAGTTAAACAATTAAGATA
ATCTAATAGTTTCCTTAATTCTGAACACAATGGCTGACAGTGATGACGAGTATGATCGTA
AAAGACGAGATAAGTTTAGAGGTGAAAGAGGTCCTGCTGACAACAGCAGTTACCGAAGCA
GCGATAGACGTGAAGAGCGTAGTCGTGGACGAGAAGAATGGACAGAGAGGTCTCGTGGAG
GTCGATCAGGTCCTGATTACAGGGACTACCGGAGCGGTGTAACTGGTACACGTGGATACT
CACCAATAAGAGGGGAGGGTCCACCAAATAAAAGGATCAGACCAGAATGGCCTATTGAAG
ATAGAAGATATGGAGGTATGCCACATGACTCTTATGGGTCATATGGTTGGGCCCATGATC
ATTTTGGCCCACATCCAGCTCATCAAGGTTATGGACAACCCATGCCACCAGTACCAGCCA
GGGATGCAGTTATGCCAGTTGGTTCAGCAGAGGGACCACCTACCATGATGACCTTCAAAG
CTTTTCTTGCTGCCCAAGATGATTCAATTACAGTAGATGATGCAATTCTAAAGTATAATG
AATACAAACTAGAATTTAGGAGACAACAATTAAATGAATTTTTTGTTGCACACAAGGATG
AAGAATGTCTACAGCGTATTCGTGTGGAAATGCTGAACAACCTACGAAAAATTTATTCAA
ACTTTGACAAAATGCTAAATGCTGTGTGTAGCTAGTAATTATCGCGTTGACCAGTAGCGC
GCAATGCTACAGGTTTCGTTTTGTTAGGGGTAGGGCTAAAATATTCCACATAGGTGGAAC
AGGTTTAAGATCAAATACCATCCTGAAGAGTCCATTAAACGAAAAGAAGAACAGCTATCT
GCATTAAAGAACCGTCTGAATGTTTTCCTTGAACTTTTGGAAACTGGAGAATTAGATAAA
GTATCAGTTGATGTGGATAAGACTGAGAAACTAATTCGCTTGTTGGATATTGTGGTTATA
AAACTAGAAGGTGGTTCTGAAGAAGATATAAAAGAACTTGATGAACCAGTGAATGTTGAA
AATTCGAACGTCAATGACAAAGCTGATAAAATAGTTTCTGACAAACTTATAGTTATTGAA
GATGATACAGTAAAAGTCAAAGAAGAGAAAGAAGACGATAAGCAGGAGAAGAAAACGGAA
TCTCCTAAATCAACAGCCCCTTTGACGATGGAGATAGACCCACATTTACGTCATTTACAA
GAACAAGCCAAATTGTTCTCTCGCTATAACTCTACTGATGAAACTGAAGAGAAACCTGCA
GAGAAACCTGCAGAGAAAGAACCCCCACCGCCCGGTTCATCATCAAGTTCTTCGTCGTCA
AGTTCATCCTCATCCAGTTCTGAAGACGAAGGCGAATCTACAAGTCGTCGCAAGTCCAAG
TCCAAATCTAAATCTAAAACTCCAGATAAGTCACCGCAAAGAAAAGAAAGTTCCAAATCT
CCAAGTGCAGTGAAAGATAAACCTTTGGAAAATAAGGAAAAAAATAAAAGCGGTGACGAA
AAAGCAGATTCTGTCAATGAGGTTGAGATAGTAGAAGAGAAGAAACGGACACGAGCATTG
CACAAGACAACATCTATTTTCTTGAGGAATTTAGCTCCCACTATAACTAAAGCTGAAGTT
GAAGCAATGTGTAAACGCTATGGAGGCTTCCTGCGGGTGGCTTTAGCAGATCCATTACCG
GAACGTCGCTGGTTCCGACGGGGCTGGGTCACTTTCCTTCGCGACGTCAACATTAAAGAT
ATCTGCTGGAACCTAAACAACATACGGTTGCGGGAATGTGAATTGGGTGCCATTGTGAAC
AGAGACCTGCAACGTCGTATCCGCTCTGTTTCGGGTATCACCTTAGAGCGGCCGGTGCTG
CGAGCTGATGCGCGTCTGGCGGCGCGCCTCGCTCATCTCCTGGACACTCGTACCAAATTG
TGGGATCAAGAGATGCAAGAGGGGGACGAGGAAAAACCTCCACAGAATGAAAACTTCAGT
CTTAACTCCAAGAATCCTGTTCTTCACAAAATTACGGAACATTTAATTGAAGAAGCATCA
ACAGAAGAAGAAGAGCTGCTCGGCTTGGAAGCTTCATCAGAAAATTCTACCGAACAACCT
GATCCGGAACTGATTCGTGTACTAGATCGTCTGGTGCTGTATTTGAGGATTGTTCATTCG
GTGGACTACTACAACCACTGCGAGTATCCGTATGAAGATGAAATGCCGAACCGTTGTGGT
ATTATGCATGCCCGTTCAGGACCACCTGCGAATAAGCCAAGTCAACAAGAAATACAAGAT
TACATAAAAACATTCGAAGGTAAAATGGCTGCTTTCCTTCAAGATGTGAAACCACTTCCT
GATGAGGAATTACAGAAACTTGGAATTAAGGATTCTGAAGCTGAGGTTGAGAAGTTTATT
CAGTCAAATACTCAAGAGTTGGCGAAAGACAAATGGCTGTGTCCATTGAGTGGAAAAAAA
TTCAAAGGACCTGACTTTATCAGAAAGCATATTTTTAACAAACATGCTGAGAAGGTGGAC
GAAGTTCGGCGCGAGGTGGCGTACTTCAACGCGTACGTGCGCGACGTGCGGCGCCCGCAG
CAGCCCGAGCCCGCCACGCGCTTGCCCA
(2728 bp)

- SilkBase 1999-2023 -