SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14684_c0_seq2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		serrate_RNA_effector_molecule_homolog_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
Transcript
Level		FPKM:1.04 TPM:1.12
ORF EntryO_BomoOtmSK13477_3prime_partial:A_BomoOtmSK_comp14684_c0_seq2
Sequence
(Nucleotide)
GTGAAAATGACGTAAAACCAAGAGGCATTCTTCATTATTGTTATTTGCTGGTAGTAAAAA
AATTCTAAGCGATAACATAACATGCAGTTGTTGTCATAAGTGTTGTGCTTAGAATTTTTC
TGAAGATGCTATGCAAATCTTAACGGTAACCTTTTTTCCCCCTACAGTCTACAGCGTATT
CGTGTGGAAATGCTGAACAACCTACGAAAAATTTATTCAAACTTTGACAAAATGCTAAAT
GCTGTGTGTAGCTAGTAATTATCGCGTTGACCAGTAGCGCGCAATGCTACAGGTTTCGTT
TTGTTAGGGGTAGGGCTAAAATATTCCACATAGGTGGAACAGGTTTAAGATCAAATACCA
TCCTGAAGAGTCCATTAAACGAAAAGAAGAACAGCTATCTGCATTAAAGAACCGTCTGAA
TGTTTTCCTTGAACTTTTGGAAACTGGAGAATTAGATAAAGTATCAGTTGATGTGGATAA
GACTGAGAAACTAATTCGCTTGTTGGATATTGTGGTTATAAAACTAGAAGGTGGTTCTGA
AGAAGATATAAAAGAACTTGATGAACCAGTGAATGTTGAAAATTCGAACGTCAATGACAA
AGCTGATAAAATAGTTTCTGACAAACTTATAGTTATTGAAGATGATACAGTAAAAGTCAA
AGAAGAGAAAGAAGACGATAAGCAGGAGAAGAAAACGGAATCTCCTAAATCAACAGCCCC
TTTGACGATGGAGATAGACCCACATTTACGTCATTTACAAGAACAAGCCAAATTGTTCTC
TCGCTATAACTCTACTGATGAAACTGAAGAGAAACCTGCAGAGAAACCTGCAGAGAAAGA
ACCCCCACCGCCCGGTTCATCATCAAGTTCTTCGTCGTCAAGTTCATCCTCATCCAGTTC
TGAAGACGAAGGCGAATCTACAAGTCGTCGCAAGTCCAAGTCCAAATCTAAATCTAAAAC
TCCAGATAAGTCACCGCAAAGAAAAGAAAGTTCCAAATCTCCAAGTGCAGTGAAAGATAA
ACCTTTGGAAAATAAGGAAAAAAATAAAAGCGGTGACGAAAAAGCAGATTCTGTCAATGA
GGTTGAGATAGTAGAAGAGAAGAAACGGACACGAGCATTGCACAAGACAACATCTATTTT
CTTGAGGAATTTAGCTCCCACTATAACTAAAGCTGAAGTTGAAGCAATGTGTAAACGCTA
TGGAGGCTTCCTGCGGGTGGCTTTAGCAGATCCATTACCGGAACGTCGCTGGTTCCGACG
GGGCTGGGTCACTTTCCTTCGCGACGTCAACATTAAAGATATCTGCTGGAACCTAAACAA
CATACGGTTGCGGGAATGTGAATTGGGTGCCATTGTGAACAGAGACCTGCAACGTCGTAT
CCGCTCTGTTTCGGGTATCACCTTAGAGCGGCCGGTGCTGCGAGCTGATGCGCGTCTGGC
GGCGCGCCTCGCTCATCTCCTGGACACTCGTACCAAATTGTGGGATCAAGAGATGCAAGA
GGGGGACGAGGAAAAACCTCCACAGAATGAAAACTTCAGTCTTAACTCCAAGAATCCTGT
TCTTCACAAAATTACGGAACATTTAATTGAAGAAGCATCAACAGAAGAAGAAGAGCTGCT
CGGCTTGGAAGCTTCATCAGAAAATTCTACCGAACAACCTGATCCGGAACTGATTCGTGT
ACTAGATCGTCTGGTGCTGTATTTGAGGATTGTTCATTCGGTGGACTACTACAACCACTG
CGAGTATCCGTATGAAGATGAAATGCCGAACCGTTGTGGTATTATGCATGCCCGTTCAGG
ACCACCTGCGAATAAGCCAAGTCAACAAGAAATACAAGATTACATAAAAACATTCGAAGG
TAAAATGGCTGCTTTCCTTCAAGATGTGAAACCACTTCCTGATGAGGAATTACAGAAACT
TGGAATTAAGGATTCTGAAGCTGAGGTTGAGAAGTTTATTCAGTCAAATACTCAAGAGTT
GGCGAAAGACAAATGGCTGTGTCCATTGAGTGGAAAAAAATTCAAAGGACCTGACTTTAT
CAGAAAGCATATTTTTAACAAACATGCTGAGAAGGTGGACGAAGTTCGGCGCGAGGTGGC
GTACTTCAACGCGTACGTGCGCGACGTGCGGCGCCCGCAGCAGCCCGAGCCCGCCACGCG
CTTGCCCA
(2168 bp)

- SilkBase 1999-2023 -