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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14644_c0_seq2
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		DNA-(apurinic_or_apyrimidinic_site)_lyase_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008311 F double-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:16.21 TPM:17.48
ORF EntryO_BomoOtmSK13426_complete:A_BomoOtmSK_comp14644_c0_seq2
Sequence
(Nucleotide)
GGGTGATCTGTCATTTTACCGGAAATTTCGCCCGCCACCATTGGTGTTTAACGCGTTTTT
TTATTTTTGAATTCCAATTATCTTCTAGTAATAAGACTGTTACAGTAATAACGAAGACAA
ATATATCTTCTTAGATCATGGCACCAAGATCAGCAAAAGCTAAGAAAGCAGCAGAAGCAA
AAGTAGCAGACAATGATGCACCTAAAAAAGGAAGAGGCAAAGCAAAAGTAGTTGAAGATC
CTGAAACTGAGTCTGTAGAAGCTGAAGTTGATGAAAAGAACATTGTATCTGAAAAGAAAA
CCAAACGCGGAAGGAAAGCTGCCGGTGACACAAATGGACAAGATGAGAATGGTAAAATAG
AGGAAACAGCACCAAAAAAAGGAAGGAAGAAGAATGTAGAGGAACCTCCGGTGGAAAATA
AATCTACTGATGAACCCTCAGTTGAAGATGAAGTGGCAGTGTCTGAGGAAAATAATCCTA
GTGAAGATGGTTCAGAAACAAATGGTCACATAGAAGAAGAACAAGTTCCTTCAGGTAGGG
GACGTAAGAAACAAACCAAAAAGGAAGTTAAAAAACCAGAGCCTAGAACAGGCAGAGGTA
GGAAACCTAAACAAGAAATAGAAGATGAAGTTGAAGACAAACCAAAAGGTAGGGGCAGAG
GACGCAAAGCCAAAGCTGAAGAAGCTGAGTCTGATATATCTGAAACGGTTGAGGATGAAG
GAAAGCCAGAAGCTGCTAAAGGCAAGAAGAAAGTTCAGAACCAAGCTGTTGAGAAGCCTG
CAGAGAATGATGATGATGAAGTAGAAGAGGAAAATGTAGAGGAACCAAAAAAGAAGGAAA
CCAAAAGTCGCAAAAATCAGGGCAAAAAAGTAGCAGCCAAAGAAGAGACTGATGATGCTG
TGAGGGAAGATGAACCAGCTTCTAAGAAAAGGAAGGTCACAAAAAAAGATGAAAAACAAA
AAGCTGCACAAAATGAAGACGATAATGTTGATGAAGAGGAAAAACCTGAACCAAAGCCTG
CAAAAGGAAGGCGGGGTCAAAAGAAGGCAGAAGTATCTGCTGAATCCCATGAGGAGCCAC
AGGACACTGGTGAGCCAACTACAAAACGTCGACGCAAGCCTGTCGAAGAAAAGGTGAACA
CCGAAGACGCGAAAAAGAAAGCACCGCCCAAGAATAAATCCACGACAAATTACGAAGATA
TTGACTTTACAAATGAATCGAAGACGACGCAAGGCAAAGAATGGAACTTCAAGATAGCGA
GTTGGAACGTTGACGGGATCAGAGCGTGGATGAGCAAGGGAGGCCTGGATTACATTAAAT
ACGAGAAACCGGACATTTTCTGTTTGCAAGAGACGAAATGTGCAACGGACAAATTGCCAG
ACGAGGTGGCTAATGTTCCAGGCTATCATGCGTACTGGTTGGCCGGGGATAAAGATGGCT
ACGCAGGCGTAGGCATCTACACGACAAAGCTAGCGATGAACGTCAAATATGGCTTGCAAA
ACGAAGAGCTGGATGACGAAGGTCGCATTATAACGGCGGAGTACGAACAGTTTTACTTGA
TTTGTACGTACGTACCGAACGCGGGCCGGAAACTAGTCACAATGCCCAAAAGGCTGCGAT
GGAACGAGGAATTCCTCAAACACGTCAAAGAATTAGATAAGAAGAAACCTGTGATAATAT
GCGGCGACATGAACGTTTCCCATAAAGAAATCGATTTAGCGAATCCGAAGACGAACAGAA
AGAACGCCGGCTTCACGGACGAAGAGCGCGCCGGCATGACGCAGCTGCTCGGCGACGGGT
TCGTCGACACCTTCCGACATTTCCACCCCGACCAGACGGGCTCGTACACCTTCTGGACGT
ACATGATGAATTCCCGTTCGAAGAACGTCGGATGGCGTTTGGATTACTTCATAGTTTCCG
ACAGACTGATTCCGTCGGTCTGCGACAACGTCATCCGCGACAAGGTGTACGGCAGCGACC
ACTGTCCGATAGCGCTCTTTCTAAATCTAACAACAGCTGAGAAACCGAAGGAATAAAGAC
CTTGTGTACTTTGTCCCGTAGCCGAACTGCCTACCAGCCCGACCCGCTCAACTGCTCCCG
ACACTCATACGAGTTATAAATATTGGCAAAAACTTGTGTCTAATTAAAAATTTTACTATA
ATATTTTAAGTGTTACTTGTAAAAAAACCTAGGAAATTCATTAATTTTCAATGCTTAATT
GATTTGATTGCTGCAGATAAGCAGACGCCCCCAATTAGTGTTAGACCCACAATATGAGAT
GTGGTTATGCCGCCGCGAACCTTGAATCTTGAACCGTTGAAGACATTGTAGGTTATAATA
ACGGTTGTCTATTCTTTAAACCGAAAAAGCGGATTGGTGCAGGTGTGCTTAAAAATTTCG
AAAAATGTTAAAAACATTAAGCCACGGCAGCTCGTGATTTTTAATCATATTTCAATTTGA
AAAAAAAAAGACAAATGATTCTGTGATTTTACGTTTCTTTGGTAAATTGCGAAAATATGG
ACTGATACATTTTGTTTCGTAACAAAATAAAATTTTGTAGCACG
(2564 bp)

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