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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14636_c0_seq5
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		extended_synaptotagmin-1_isoform_X1_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031210 F phosphatidylcholine binding
GO:0031227 C intrinsic component of endoplasmic reticulum membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0044232 C organelle membrane contact site
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.87 TPM:0.94
ORF EntryO_BomoOtmSK13400_complete:A_BomoOtmSK_comp14636_c0_seq5
Sequence
(Nucleotide)
GTCTTAACCAATAATAACTATACATTTCTTTCTTTTTCAATCTTCTTTATTTATGGATCA
ATAATATTATATATAGTAATAATGTTGAGATATTTGTAAAAGAAAAGATATAAATTGGCG
TAAGTGGGGTTTTATTATTTCTAAAACTGCACAAATAAACGATCACACCCCTAAAACGGA
TAGTGGCAAGGTAACTAATGTTTTGAAATTGTGATGTTTGTCCTAAGGCGATAATAAGTT
CAAAGAAGAGTCAATCGCTGCAGTGCGAGCTGTGGGACTGGGACCCTGGGATGGGCATTC
AGAACGATGATTACCTCGGCAGGTGTTCATTGGACATATCTCAAGTTGTTCGATTTGGCC
GCTTGGACACTTGGCAGACCTTGCAACAAGCGAAGCACGGTAAAGTCCAACTGAGATTAT
CTTGGCATCGTTTATCCACGGATGTAACTGAGTTAAGTCGAGCACTGACGGAAACTCTCC
TTATCAAGACGGGAGATTTGAGCTCAGCAGTACTCTCTGTTTACATAGACTCGTGTAAGA
AGCTACCGAACGCCCGTGTGCAATCCCGTCCGGATCCTTACCTGATGGTGACGGTTGGCA
AAAAAACCGAAAACACCGCCGTGCAACTGCGAACCGACGATCCCGTGTATGAGATCGGAT
ATTCTTTCCTCGTCCAGAACCCTGAAATCGACACGCTTGACGTCAAGGTTCTCGACCAGA
AAACTGGAAGCCAACTCGGTCAATTGTTTTATAGCATCTCCGCTTTGCTTAAAGAAAAAG
ATCTGACGATGCTGACTCAGCCGCTGATGTTGCAGAAATCTGGGCCCGAGTCCAAAATCA
TACTGTCCTTACAATTGAGGATTCTCAAAGAAGCCATAAAAGAGGTCGATATTGACGAAG
AGAGTTTGGAAGCGGCGGTCGCGGAGCCGAGCCCCCCCACCCCGAGCCCCTCCGTGTCGT
CGGCGGCCACCGACACCACGGACGGCGGCGCCTCGCACCCGCGCCCGCAGTCCGCCGCGC
CCTCCGATCCGCCCCCTGTCCAACCTGCTTCATCAGGTGATACTGAGTTAAAGAATATTG
AAGATTCTGTACAAGACGACGCCTCGCAGAGATCCGTGCCAGAGGAAATAATTGATAAAG
AAGTCGAATCTCCTCAAGAATACCAACCTCCATCTGGACGCGACTCGCCAAAACTCATCC
ACAGGACTTCGTCATTAACTACTTCCGCTGGGGAAGCCGGTCTGGGCCGCATATTACTCT
CTCTGCGCTATAGTATGCAGAATCAAACATTATATATTGTTGTTCACAAGATAATGAATA
TTCCGCTGAAAGATCCTACAAATGTGCCCGATCCGTACGTTAAATTGTATCTACTGCCGG
GCAGAACTAAAGATTCAAAACGCAAGACAGTGGTGGTAAAAGACAGCTGTATGCCGGAAT
ATGACGAACAATTCGAATGGGTGATTCCATTAGCTGAGCTTCACTCCAGGCAAGTCGAAG
TCACTGTTGCCACCCACAAGGGATTCCTGGCTGGCAGTCCGGTCATTGGACAGGTTGTAG
TCCATCTAAATCAGTACGATTTCCGTGAAGCTAAAACCCTGTGGTTCGATCTTATGCCTG
AAACATCCCCTAGAGACTAAGAGATGCAATTTCGAAGTTTGATGTACTTATGAATCTATT
AAATATTAATAACACTACACGAATATAATCTAATAAGTACTATTGTAACTTCAACTGGGA
TCTGATGTGCAAATCAATTTCTATATATTGATCTGAATATGTTATAACTTTAATGGCTTT
AAACGATTCACTCATAAAACTCTCAAACACTAATAAAAGAACGAAAATTGGGTCATTATG
CCATGTAAAAAAAATTGTGGGCTTATGGCCCAATCGTAAGTTTATAATAATAATTATAAA
ACATGCTTTGCCATATCTAACTAGCCTGCAAGCTTATAAAGCTTTTTAAAAATTCAAGTA
ATGGAAGCATAATGATTACAATCACGTAATATTATGATAATTGTCACAACCAACCCAGAA
TCCATTTACTGTTAAAACTGAAAAAAAATATGAAATTTAATATAACCACAAAAATAACTA
ATTATGATAAATTTTATGTGTTTCCGAATTCAAACTTCATATAATGAATTTGTAGAATTT
TATTTTCTGTGTTACTATTACGTATTTTGTCATTGTTAAAGCATTAAAATGTTTAAGATT
TGTTAAAAATTCAGTAAATGTGGTAAGTGCACTTTTTTTATTTAATCAACATAAAAGTAA
AATAAGCAAAAAATCTGATGAAAATACTAGTTGTATGAGCGTTATTATTTCTTATGCATT
TATTTTTTGCTATATACTTTATACGCTTTAAATGTTTACTTTAATAAAGGTATCTGTTAA
AA
(2402 bp)

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