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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14636_c0_seq2
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		extended_synaptotagmin-1_isoform_X1_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031210 F phosphatidylcholine binding
GO:0031227 C intrinsic component of endoplasmic reticulum membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0044232 C organelle membrane contact site
GO:0046872 F metal ion binding
Transcript
Level		FPKM:15.14 TPM:16.32
ORF EntryO_BomoOtmSK13394_complete:A_BomoOtmSK_comp14636_c0_seq2
Sequence
(Nucleotide)
GTTCCGTTTGACTGTTCCGATAAATACGCCTCACCCCTAAACTAATATTCTAATACTGAA
TAAATTGATAGAGTTTTATCCACTGAAGTAGGAAACCTAGGTCTATGGTTTTAACTTACC
AAAACATTGAAAGGTCGAATTATAATCAGTTTACTGAATTTACAAGCTATCAAAATCGTG
TCTACCGTGCTTTGTATTACGAATTACGAGAAAATATTATCAACGGAATGTAATGATTAA
AATTGGCCAGTGATAATAACATGGCAGGTGCAAGCAAAACTGCCTTACCACCAGGCAGTG
ATGATGGCAACAGTGTTTTTTCTATGATGTACACATTTCTCAAAAAGGTGTCGATTGTAG
GAGCTGTGTACTTAGTAGGTTATATGCAATGGAGCGTTGCGTGGCTTATTGGGCCCGTTA
TATTGTCGGTGATGCGCGATCAATGGCGCAAGGAGAACGAATACAAACGCAACATCGCAA
AGGTCGCTGCACTGTCTTCTGAAAAAGATGTGATACTAGCGAGACTTGACGACTTGCCTT
CATGGGTATTCTTCCCGGACGTCGAACGAGCCGAATGGTTGAACAGGATACTCCTACAAG
TCTGGCCGAATGTGAACAGCTACGCAAAGACTTTATTGAAGGACCTGATCGAACCGGCTG
TCGCGGAGAGTCTGGCCAATTACAAACTCAGCGGATTTAAATTTGAACGTATGATTCTCG
GTACCATTGCGCCGCGGGTTGGTGGCGTCAAGGTTTATGATAAGAATCTCTCGAGGAATG
AAATCATCATGGACATAGACTTATTCTACGCCGGCGATTGCGACATCTCATTCGTACTTC
AACGCATTCGCGGAGGAATCAAAGATCTCCAAATTCACGGCATGGTACGTGTTGTAATGA
AACCTCTGATCTCTAAAATACCGTTAGTCGGAGGACTACAGATCTTCTTTTTGAACAACC
CCTCAATCGACTTCAATCTCGTTGGCGCAGCTGACATACTAGATATGCCAGGCTTTAGTG
ATATACTTCGTCGATGCATCGTGGAGCAAGTGTCCAAAATGATGGTGCTGCCTAACAAGC
TTTCGATCAAACTAAGCGATGAGATTCCAACGGTTGATCTGCGCATGCCTGAGCCGGAGG
GTGTACTTCGCATACATTTGGTTCAAGCTCAGAATCTCATGAAGAAAGATGTTTCTATGC
TAGGAAAAGGCAAGTCAGATCCGTATGCAGTTATAACTGTGGGCGCCCAGCAATGGAAAA
CGAAGCACATTGATAACAACGTGAACCCGCGATGGGACTTCTGGTGTGAGGCGCGTATAA
TGCAATCCCTCGGTCAGATGTTGGATATAGAGGTGTTCGACAAGGACGAAGGCAACGACG
ACGACAAGCTCGGCAAGTGTTCATTGGACATATCTCAAGTTGTTCGATTTGGCCGCTTGG
ACACTTGGCAGACCTTGCAACAAGCGAAGCACGGTAAAGTCCAACTGAGATTATCTTGGC
ATCGTTTATCCACGGATGTAACTGAGTTAAGTCGAGCACTGACGGAAACTCTCCTTATCA
AGACGGGAGATTTGAGCTCAGCAGTACTCTCTGTTTACATAGACTCGTGTAAGAAGCTAC
CGAACGCCCGTGTGCAATCCCGTCCGGATCCTTACCTGATGGTGACGGTTGGCAAAAAAA
CCGAAAACACCGCCGTGCAACTGCGAACCGACGATCCCGTGTATGAGATCGGATATTCTT
TCCTCGTCCAGAACCCTGAAATCGACACGCTTGACGTCAAGGTTCTCGACCAGAAAACTG
GAAGCCAACTCGGTCAATTGTTTTATAGCATCTCCGCTTTGCTTAAAGAAAAAGATCTGA
CGATGCTGACTCAGCCGCTGATGTTGCAGAAATCTGGGCCCGAGTCCAAAATCATACTGT
CCTTACAATTGAGGATTCTCAAAGAAGCCATAAAAGAGGTCGATATTGACGAAGAGAGTT
TGGAAGCGGCGGTCGCGGAGCCGAGCCCCCCCACCCCGAGCCCCTCCGTGTCGTCGGCGG
CCACCGACACCACGGACGGCGGCGCCTCGCACCCGCGCCCGCAGTCCGCCGCGCCCTCCG
ATCCGCCCCCTGTCCAACCTGCTTCATCAGGTGATACTGAGTTAAAGAATATTGAAGATT
CTGTACAAGACGACGCCTCGCAGAGATCCGTGCCAGAGGAAATAATTGATAAAGAAGTCG
AATCTCCTCAAGAATACCAACCTCCATCTGGACGCGACTCGCCAAAACTCATCCACAGGA
CTTCGTCATTAACTACTTCCGCTGGGGAAGCCGGTCTGGGCCGCATATTACTCTCTCTGC
GCTATAGTATGCAGAATCAAACATTATATATTGTTGTTCACAAGATAATGAATATTCCGC
TGAAAGATCCTACAAATGTGCCCGATCCGTACGTTAAATTGTATCTACTGCCGGGCAGAA
CTAAAGATTCAAAACGCAAGACAGTGGTGGTAAAAGACAGCTGTATGCCGGAATATGACG
AACAATTCGAATGGGTGATTCCATTAGCTGAGCTTCACTCCAGGCAAGTCGAAGTCACTG
TTGCCACCCACAAGGGATTCCTGGCTGGCAGTCCGGTCATTGGACAGGTTGTAGTCCATC
TAAATCAGTACGATTTCCGTGAAGCTAAAACCCTGTGGTTCGATCTTATGCCTGAAACAT
CCCCTAGAGACTAAGAGATGCAATTTCGAAGTTTGATGTACTTATGAATCTATTAAATAT
TAATAACACTACACGAATATAATCTAATAAGTACTATTGTAACTTCAACTGGGATCTGAT
GTGCAAATCAATTTCTATATATTGATCTGAATATGTTATAACTTTAATGGCTTTAAACGA
TTCACTCATAAAACTCTCAAACACTAATAAAAGAACGAAAATTGGGTCATTATGCCATGT
AAAAAAAATTGTGGGCTTATGGCCCAATCGTAAGTTTATAATAATAATTATAAAACATGC
TTTGCCATATCTAACTAGCCTGCAAGCTTATAAAGCTTTTTAAAAATTCAAGTAATGGAA
GCATAATGATTACAATCACGTAATATTATGATAATTGTCACAACCAACCCAGAATCCATT
TACTGTTAAAACTGAAAAAAAATATGAAATTTAATATAACCACAAAAATAACTAATTATG
ATAAATTTTATGTGTTTCCGAATTCAAACTTCATATAATGAATTTGTAGAATTTTATTTT
CTGTGTTACTATTACGTATTTTGTCATTGTTAAAGCATTAAAATGTTTAAGATTTGTTAA
AAATTCAGTAAATGTGGTAAGTGCACTTTTTTTATTTAATCAACATAAAAGTAAAATAAG
CAAAAAATCTGATGAAAATACTAGTTGTATGAGCGTTATTATTTCTTATGCATTTATTTT
TTGCTATATACTTTATACGCTTTAAATGTTTACTTTAATAAAGGTATCTGTTAAAA
(3476 bp)

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