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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14634_c0_seq2
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X3_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008354 P germ cell migration
GO:0008583 P mystery cell differentiation
GO:0009950 P dorsal/ventral axis specification
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0035192 P nuclear cortical migration
GO:0036459 F thiol-dependent deubiquitinase
GO:0045824 P negative regulation of innate immune response
GO:0045861 P negative regulation of proteolysis
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050896 P response to stimulus
Transcript
Level		FPKM:4.40 TPM:4.75
ORF EntryO_BomoOtmSK13389_3prime_partial:A_BomoOtmSK_comp14634_c0_seq2
Sequence
(Nucleotide)
CCGCCACCCCACGAACACATCGCCAGCAGCTGCTCCGCGCACGACACGCGCACTTGTGGA
TTTGGGCAATCGATCATTAAGTAAAGAGCGGTATCCTGCCACCAAGGTTCGTTAAGCAAC
ATATCCAGTCTTCCGCCGCCAAGCGCCATGCATATAGTCACCACTTCCATACATTCTCGG
ACCAAGGTAACGTCGTCAGGGTGTACAATGCTAGTCATCTCGACAGGTTGCGCCACAGAG
TATCCGAGTGCAAACAATGCCCGGACCGTCGCCATCGTAGGGACGCGCCACCACACTAGT
GACGATACGGAGTCGCTCTCTTCTCCGGCGATCACAACCTGTTCTCCTAATGAATTCGCC
AACTTTTCCGCTACTGCTTTCACGATCATTTCACAACTGTGATTTGGTATAGTGGTGAGA
GCCTCCCTTAAAATAGTAAGATCCATTCTAAAATCTTTGTCCACCGAAACATCAGATCCA
TCTGGCGCCAATATTTCAAATAAATATCCCAAGGTGTACAAAATTAACTTCGCCAGTCTC
ACTAAGGCTAAATAACCTACCCTTCTGGTGTGGGGAGCAGCATCTTTTAAAAAATCCTTG
TCAGAAAGGCATTTTACCAGTAGCGGAGCCTTCTTTACACAGGCCAGCTGGTAATTCCGG
CTACGTTCCAGTCTCGTGTCTGACGACGGCATCACCATGCTGTACAATACCTCTATATTG
TAAGCTACAGTCGGTGGTGATGGTCCATAAAGCATATCTCTGAGTTTCGTGTCGTCCCTA
CATAACAATGCTTCTGTTAATTTCTCCATTGTTAGTTTATGTGCAGGACAAATTTGTGAT
AGCAGATGTGCCGCTTCAGTCAATGGTCCATGCAACTTCGTAATGCCAACATGTTCCAAT
TCTAATATAAATGGTAAGTACCACGAGCCTTGCGCAAACAGAACTCCAGGTAATGCGTTT
TCAGGAGTAGGTGAAAGTGGCGGCGAAGATGTGCTAGAATCACTACTGGATTCATTCGAG
GAACCGCATCCGCCGCTACCACACACTTGTCCATCATAAACCTTAGCGACGATCAAAGTT
TTATCACGGAGAGGTATCTGTGAAAGTATTTTCTTATCGTGACTAGAATCCAATAGTTCA
CCATTTACAAACAATTCTAATTTGTTAACATAAAGTTCTAATTTAATGGTACTATCCGAG
GCACATTTTAATCTTCTTTGGATCGATGCTCGTAAAGAATGCAATGTCTCGTTAGAATGC
GAAAATAATTCTATATCTTCAATTTGTCTTTGGCCAGTTTGAAAGTTAAATCTTACTATT
ATTGTACATTGTCTTCCGCGACCGGCTCTGTAGATAGGCAGTATTTGTCGCTCCGACGAA
AACCTTCTATCACATTCATTAATGTATTCTTGTATGGCACGAATTATTCTACACATTTTT
GTACAAACTTCGGGATTATCTTCTTGCTGTTCCATTTCCCGTTGGAGTCGTTGCGTTCGT
GCGCAGCACTGCGTAAGGAACGACTCGTGGTGCATCGCCGGCGACAGCTGCGGCCCCACG
CACGTGCACACTTCCCGCAACAGCTCTATGCCGCGCGCCGATATGTCGTCGTCGCATTCC
GTTATCACTCTCCATAAATAATCTATTCCTATGAGATCAGCATCGTTGAGTTGAAAACTT
CTACGTTTAATCCTAAGTTTACCTTCTTTGGCATTCACAGCTTTAAAAAACCTCTCAAAA
CATTTAATACCGGCATGGGTTAATAAATTAGGCGGTAAAGTCATAATGTTACGTCGAAAA
AAATGCAAGTTGATATTTGGATCCAAATCAGGTTCCTCTCCCATGAGTTTACTGAACCAT
CGAAAACAGGCTTCACGGTCTCCAAGGTGCGCTGGCCTTTCCGCTAAACATACCCAAATC
TGTTTTGCCTGTTCAGCACAAAGCCACAATTGACCATCTTTCAATAAGAACCGCAAAAAA
CTAAGTCGTTCATGAACCTGAGCTGCGTGTGGATATCTTCCATCGGGTAACCAATTCTCC
CAATCGATAACACCATCAACTGCAAGTTTATTACGAACTCCATCCATATAACTTGTAAGA
GAGTTTGTAACCAATATGACAAGGGAGTGCTGCGTTTGTAGCCGGTCGATCAGTTCCTGT
CTCGTAAGATTAGGTCGCACGCCCGTTCCTCCGCCCGCTTCGTATAAACAACAGATTTCT
TTCATCATCTTAAGCGCAGGAAGCACCCATTTTTCGTTTGTTTTTAACTCTTCTACGCAC
TTATTTAGCCACAGAGTTTTCTGTGCATCGCGATCTTGACTACAACTGTAGTCGAGTATT
TTGATTAGATTAGCAAGGGCCACGTCAATTATTTCTGTGCATACCTCATCGGAATGTGCC
AAGTTCCAAAAAAGTACTAAAACCTTGTTCGCCATTACTCCATCTTTATCATCTTCAGCA
AGCCTTCTTATTACCTCTAACAATTTGTCACTTTGTTTTTTACTTGATGAAGCCCAACTA
GCCTTAAAACAGTCGAAAAGATGGTCTAATTGGTCAGGGGTAAAATCCCACGCTAACTTC
GACAGTAAATCGTGCAGGTTTTTCACGATAGCTTCATGTTTCCCGTGCTGCGCCTTCCAA
ATAGCGTCCAAGTCTTCTGTGGTTAACGAATTTTCTTTGATCATAAACCTTAGCATTTTC
TCTAATCTGTCCACATATTGAGGTTGATGAAGAGAATCACGAAGCACAATGTCCACTACT
TTGTTCTCACGAATCCAATTCGTTATGACAGCAGGTGTGAGCCACTCTGGTTTTGGTTGT
TGTGAAAAAGTACTTATAAGTTGATTAATTTCATTCAGTGCTGACATTTTGCCATTAAAT
GAGGACATTTGTAATAACCTCAATATCATTTTCAATCGAAACATTTCAAGAGACTTAAGA
AGACTATGATGTTGTGGTGTTTTTGCAGAAACATATTTACAAGCCCTAATCAAACAGGAA
ACGGTATCAGTCTTATTTTCACTACCTCGCGCTTCCTTCTTCAATTCTTCGTCGGATAAA
CTTTCTAACAACGTTGGTATGCATTCAAGCACAGGTAATAAGTATGTTGTAACAGTATGT
GCAGTGAGAAGATCATGACAGACACCAAGAGGGCGTAATAAATGCCAGACCTCTGTGACT
CTTGTTTCAGTTGTAGACTGTTCTAATGATGAAGGCTGGTCGTTACGAGACTGTGTCATT
GAATCACTGTTTTCCCCAATAACAAGAACTGGTTCAATACAATTGGTGTTAGATGTCTTG
CTCTCATCACTTTCTTTTTCCATCATCTCAGACAATACCTTTTCTTCTGTATTCATAGAT
GAATTGAGATCAGACTTTTGAAATCCCATTATCTCTTCAAACCTCTCCCTTAATTTCACA
AAGCCGCCTGCTTGACCAAACACATTAATTAGATGGACCAGCCACCCCCTAGGAGTACGA
TGATCATGAGACCTAGCAAAAATTTCTATGTCTTGAGAAGGCCCTTGACCTGTACCAGTG
GTATTTGATGTCACCGAAAGGCCCTCGCTCGTTCGCGATGCATTGAACATATGAAACTTG
TTACTGGGGTTTAATGTCATAGTCAATAGATGCAAAAATCTGGGATCATCAAGTTTAAGA
GCACACAACTTGACTAGCTTCTCACAGTTGGATCTTACACACTGTTGTATATTATTTTTC
CACGATGATACTGCATCATCTGTTAATATCTTTGTAAAAGATATTGTGAGAGCATCAGTG
TAAAATTTCTGACACGCCGCATTGTGTACATCTTCTCCTTTTGCAGCTAGTTCTGTTGCA
GCGACTAGAAGAGCTTCCAATTCTTGTTCTGGCAGCACTGGTACAACCCAACGGGGATGT
GAAAGTTTGTCTTCCAGTGCCTTTAATTTCGCCTCAGGGAATGCCATCTCCCCAGGCATC
TGGTCTTGTTCTTTCATGGTTATAGTCATTATTTGAAACGCTGTCTCATTGCATTACCTT
CGTTCTCAGCAAATGTATTAATTCTAGAAAATCCAAAATAATTCACAATGATTTCACTAA
CACTTTTGACG
(4091 bp)

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