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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14589_c0_seq5
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		dystroglycan_isoform_X3_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043236 F laminin binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
Transcript
Level		FPKM:0.80 TPM:0.86
ORF EntryO_BomoOtmSK13223_complete:A_BomoOtmSK_comp14589_c0_seq5
Sequence
(Nucleotide)
CGTCGCCCTCGTCAAGTCGTCAGTCAATAGTTCCGCGTCACTGACGACGACAGACGCTTA
CACTCCAACAAAAGATAATTTACATCGACCCTAAATATAAAAGGAAAGTGACTAATTCAG
TGAATAAATTTAATTGTATTCCAGAATTTAGTGTTAGCAATTGATGTGTTAAGTGATCGA
AAACACCAAAGTTTTGAAACAAAATCGTGTCGTTTTGGTTGCAATTATAGCAGATTTGTT
AAGAAGTCTCAAGGTTAAATAGTTCCTGAAACGCCGTCCGTTTCGGCTTCAATATAAACA
AATCATCAAGATGAGTTTATGAGAGTTGTTGGGAGCATTGTGCGTGAGTGTTGAAGATGG
GGTGCGCAAGGTACATCGCGTGCGCGCTACTCTTGCTGTGTCCTCTTGCTCTCAGTCGGC
ACGACGACGACTTCGCTTTCGACAATAGCGAAGAATTCCAGGTTGAATTAACGGCAAACC
ACTCAGAGATAGCTAAGAATGGCCTAAGGAGATTATGGGGTGTACCCGACACGTTGGCCT
ATGTAGGACATCTGTTCCGCATGGAAATCCCCAAGGAAGCGTTCTCCGGAAAAGTCGTTG
CTTATAAAGTTCGCAGCGACCACGGGAGGCGTACACCGAACTGGCTGGCGGTGGATTCGA
GGCACGGTCTTATTAGCGGTATCCCACAGTACCAGGACATTGGAACTCACACATTCACCG
TCACCGCTCACGGAACTACCAAAGGACTCACTGCAACCGATTCATTCACTATCGAGGTGA
AAAAGGGTGAAGACAAACCTCATTCGAAATACGGGACGTGCATCGGAGATGAGAACAGGC
TGGTTCTCCTTATTCTGGTTGACGGAGCGTTCCACAAGATCGTGCCTCGACAGAGAATAA
GAGCCCTGATGCAACTCGCAAACTTTATGGCTCTTGATGGGGACGAATTTTGGATGGAAC
CTTACAAGACTGAAACGCATCCGGACACAATATTAAGCGGAATCGGTTCTTCATTGAGGA
AACGAGGCGATGCCACAACCGCCATTTATTTGAACGTCGGCTGCGGGAACAAGCTATGGG
ATCGGCACAAGGTGCTGGTGGCAGGGCTGCGGGAGCAGTCGCGCGACGGAACCCTCGAGC
AGCTGCTGCGGCTGCCCGTCATCGGCTGGAGACTCCTGGCCGTCAAGCCCACGTTCAGAG
TCAAACGACAGTCCCCGATGGAGGGGTCGGGCGACATGTACGACGCGGAGTACGACGGCG
ACGACGACGCGGACTACAGCGGCTACGACGACGACAACGACGACCTGAACTTCGAGGACG
CGCGCCGGAACGATGTCGGCGTACCGGAGCTGGACGAAGACCACGACGTGAAGATAACGC
CTTACTCCGAATCTGCTTCGGAAACAAACAACATAACGTTTGTGCCGGTGTCATCGAGAC
ATCTAGAGGACGTTGCCATTGTGCCAGATTACATTCCAACCACGACGGAACCGGAAATGC
AAACCGTTATGATACGCGCGTCAAACGAACTGCCGCCTTTGTCGTCCGAGTCGCCCCCGA
CCGTGACGTCACAGTCCCCCGAGCCACCCACGCAGCCGATTACCACATCCTCTACGACGA
CGTCTACGACCACCCAAGCTCCGGCCACGACGCCGGTCACTGTTCCGGTTACGACGCCTG
TGACTACGCCGGTGACTACGCCAGTCGCTACGCAGCCGCCCACTACGACGACCAGCACTA
CGCCGATGACCACTGTACCGACAACGGTACCGACTACAACCGATCCACCAGAAACCACTA
TACAGGAGGTCACCAAACAGGAGTCCACTGTGACGGAGGGTAAGAGCACAATAATCGGTC
AAACCACGGAGACGGTGACCTTCGCGATGCCTGTCAACCAACCACCGGTCCTCAAACATC
ACATGAAGAAACTCGCTATAACTGCTGGAAAAGCCTTTAGATACATAATCCCCACCGATC
TGTTCATGGATCAGGAGGACGGGAGCAACTTGACTTTCACGATGTACGAAGCCGAAAACG
TCCCCTTAAGCAAAAATTCATGGATACAATTCATACCGTCCGACCTTGAAGTTTACGGAC
TACCGCTGGAAGCCCACGTCTCACGTTGGAACTTCATAGTGGAAGCTCAGAACAGCGCCG
GCCTGAAGGCCCGGGGCCCGCTAGACATCACCGTGCAGCAACACAAGAGCGGACGCACCA
TCAACCACCGCTTCATCATGCAGTTCACGCTGCTCAAGCAGTACAATAACGCCATCGACT
GGCAGATAAGGGCCTTGGAGGGAATAGTGAATCTGTTCCGGGACACCGACATGGACCATC
TGACCGTGTTGAACGCGACCCAAACGGGAGATCTCTGCGAGTTCGTTTGGACGAACGATA
CCCTGCCGAAAGACGCGGCTTGTCCTATGGATGACATCAATAGGCTTATGAAGATAATGG
AGTCTGAGTCGGAGCCGGGTCGCGGGTCCCGCTTGCTGTCGCGCGCCATGTCCCCGGAGC
TGGGCGTGCGCGGCGTGCGGTGGGAGGGGC
(2550 bp)

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