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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14586_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_proline-rich_extensin-like_protein_EPR1_[Amyelois_transitella]
Ontology
GO:0002039 F p53 binding
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006914 P autophagy
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010506 P regulation of autophagy
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0036459 F thiol-dependent deubiquitinase
GO:0044325 F transmembrane transporter binding
Transcript
Level		FPKM:1.74 TPM:1.88
ORF EntryO_BomoOtmSK13196_complete:A_BomoOtmSK_comp14586_c0_seq1
Sequence
(Nucleotide)
GCGGTCCGGTGCTCGCCGCGCTGGCGTTGCTTCCACGACCGCGCCCGTTCGTTGTCGTCG
TGGTGCCGTTTGCACTGAACTCGTAGCATAGTTCCACCATGGAATCAATTACTGGTGTGC
TGGATTTGCCGCGACGTGTTTGATACGGCAAGGCTTTGAGCAAGTTGTAGAAGGGAGGGC
ACGCGATCAACGCTTGCAAGATTGCATTTACATAGCAATAGTTCGAACGGTTAGTCAAAC
CGCGAGGCAAGATTGCGACCGGACGGTGATCTAGCTGATATTTAGTCAGAAATTCTCCCA
TTCGATAAGAATTAGGATCGTCGCTGAAAGGTGAAGGTTGCGGTGGCACGGCAGGGGTGG
AATCGCGTTGTACCGGAACTTCACGCTGTTCGGCATGGGATTGGCCTGCCGTCGGTTTTG
GAGTTATCATTGGTGGCGACTGAGTGCTACCAGAATTTACCGACGTCTTCTCAGAGTACG
ACACCGCTGGAATCGAGGCTGGAACCGGACCATTTTTATCGGGAGCGGCACCCGGCAAGG
GAGAGGCATCAAATGGTGGAACTTTGGCTACCGGTTTTTGCAAGTTGGGAGCGACAGGAG
GTGAACTGGATATCGGGCTGACTGACTCTTCAACGACAGGAGCTGTAACTGCTGGAACGG
GCGCCGGTGCAGGTATACTAGGTTTCGAAGAGAATAGACTAGCCCACGATTTGCCAGGCG
CGGGTTGCGGTTGGGGCTGTATCACAGGCGGTGGTGGCTCGGTACGGTTGCGAGGTGTCG
GTGGTGGAGGGAAATCGGAAGCCGTCGGTGCTGGTGGTGGAGGTTGAGGGGCGGGTGGTG
GCTCTGGAGCTCCGCTAGCTTTTCGGGAATGTCCGAAAGGCGCTTTACTTGTCACAATCA
ACGGTTGACCCGCTGAATGAAGCGTAATAGATATTGGCATAGGCGCTTTACTCGGAGGTA
GTGGTGGTTCTCTTTTGATATGCTCTGTGACCATAGATCTCTCATTATTGTCTCCCATAT
CATTTGATGGTGATCGATTAGATGTTCCTTCACGCTTTTGTCTGTTTGCAAACGGTGCTT
TAGGAGTCGATACAGTCTGCTGGAGTGGAACAACAGTTTGAGGTGTCGCCGGTTTAGAGG
GTTGTTTGCCGCTTGAAAACGGAGCCGACGGTCCCTTGGCCGACTTTCCAGTAGTTGGAG
GTATCTTTACAGCTGATGCAGCAGCTGTGGTTTGTGGCGGGAAACTTCTTGCCACCGCCG
GAACCTGGTTAGTGTTGGTAGCATCCATTTTGTCAGAGATTGAACTTGTTTGTTTTGAAT
CAATCTTTTGAGGAACTTTATCCACCATAGAAGGAACTTGTTTTACCTGACTAATCTCTA
TCGATTTTTCATTTTGCTTGGGACTGTTGGGCCCTTTGTTTGCTATTTTAAGATCTTTAA
TGGGAAGCCCGTCAACGTTCGCGGAAGCGGTCGCAGTTGGCGGCGTACGACGTTCTGGTG
TTTTGTCAACTGGTGTATAATTTCTGCCCTGACCTTGTACAAAGTTCTTGGCGTGGACGT
TGAACTGATGCGGGGTATGGTGGTGATGAGGAGGAGGCTGCAACGGAGGCGGATGGTGAG
GAGTAGGTAAGTAAAGCGGCGGGACGTATTCCACGGCTCCTTCTACTGGTGGCCCGTAAG
GTGGAGCGGCATAATGAGCACTAGCATAATAAGCATCAACTGTTTCTTGTTCCATCACTA
CTTCAGGTGGATATTCTTCTGGGCCTTTCTCGGCATCTCCTTCTACAGGCATTGGGTACT
CTGGATAATATGGAGGGTACGTGTATGGTCCATACACTAAAGGTTGATAAAAAGGCAAGT
GGTAAAGGGGAGCACCCTGCGCTTGTGCAGCCGGATAATATTGCGGGTACTGTAAATAGT
ATGGTTGGGGTTGATGAGAGGGGGGTGATGGCTGCCGCTTGCCGCGTCGGTCCCGTCGAT
TGGTACGAGGAGCACGTTCCTGCGTTGATGGGACGTACTGTGGCGTGGGCGGTTGATAGT
ACTGGCCCATATAACCGTGTACGTTGACATTCGCGGTGACCTGGCTCACGTACACGTTGG
GTGGTGCTACAGGCCATTGCGCGTGCGGTGGTGGATAAGTGGGTGGAGGTTGAGCGTAGG
GCGGCGGGTGAGGGGCCGGCCCGGCACCACTCCGCGCCGGCGAGTGAGGCGCCATCTCGC
CCTCGCCGCCCGACAGACTATCCACGCTGTTCGACACGGTCGGAATTCCCACTTTGCTCG
CACCAGAGGATCCACCTATTGCAGGTTTCGTGCGACCAACGGTATGGGCCGCAGCGGAGT
CCAATTTATTTTCAAATAGTGCACACTGCAGACTGCTCAGGTCTGCTCCCTTCACATCAG
ACAAGTCTAGGAACTCATATTCCTCCCACGTGCACACAATTCGTTTTCATCAAATCCATG
GCCTGTAAGAGAACACCATCACGAAATTTAACGCCGCAATATTAGTAATAAATAGCGGCG
GCTTTTCTACAGTAAAATCTTAGACGAGATCGACGTCGAGGCCATGCACTCACCCAACAC
AACAGGATGTGACAAATAAATCGCCATTTTGTTCTCAGAAGTCAACCAATA
(2631 bp)

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