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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14557_c0_seq4
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_isoform_X1_[Bombyx_mori]
Ontology
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
Transcript
Level		FPKM:0.64 TPM:0.69
ORF EntryO_BomoOtmSK13089_complete:A_BomoOtmSK_comp14557_c0_seq4
Sequence
(Nucleotide)
CCGACGAGTGCATTCACTCTTAAGCGTGTCTCTCGCTTACAACGCACAACAACTTAGATA
CATATAATTTGTAAAACTTAGAAATATTTAAGGGTGTGTGATATTATTAAAACAAGATAC
GAGTGTTGTGTTCTACAATATAACTCAAGACTTAAACCTCTGTTCGAAGGTTAATTTCAT
CACTGACAATGGACGCGACGAATTCGCATGCTCGTAGTAGGCACCATGAACGGCGAGGAA
GACGCCATCGTCAACGCAGACATAACCAACAGCCTCACAGCAATGTACCAGAGCAACCCT
CAAACTGTGTACCGTTCCACGAACGCGAATTCGGTAAAACAAATCATAAACAAAAATTTC
AGACCAAAGTTCACACTTTCCGCCGAACGAAACCAATTTATGAATTTCCATTTTGATGTG
ATATTATATTCTAAGTGCTTAACGTTTTATAGTAAACAGTAATATTACGATTTACAGTGG
AAAATAAAATGGGATTACCGCCACCATATGAACAATCGGTACCGAATCCAGCTCCGCCTC
CTTCGTACTTTGGCAATAATCCACCACCGCCTGCCGGTTTCGTTGCTCCCGAAGCACCTC
CGCGTACTACAGTGATAACATCACCCCAAGCACCGGCAGGACCACCAGGAAAGCTAGGCC
CAGGGCCAACGGGCACTACGTGTCAAACGTGCAACAAAACAGTAGTCACCAGAGTGGACT
ATGTTCCAAATAACAGAACACACATTATATCGGCAGCTCTCTGTATTTTAGCTGGATGCT
GTTGCGGGTGTTTCGTTCCGTATTGCATGAGATCGTGTAAAACAGCCAATCATTACTGTC
CTCAATGTAAAGCATTCGTCGGTGCTTTCACCCCATCTTAGATTTATTTGGCAAAAAATA
TTCCTAGATCATTATTCCGTAACACTTGTAAGCTAGTTAAATATTTTCATATTGTCCTCG
AAATACAAGTTAATTTTTGTAGGATTTTGATCTCGTTGATTTGAAAATAAAAGATTTAAA
GGTACGTTGTTAAAAACAAACAAGCTACTAAAGTTTGGCGGATGTTTTTCTTCATTTCCA
ATATCATCGTAAATAAGTTGGGTGCAAATTAACTTTATGCAAATGTAATTTAGAAATATG
TATTTTAATTTTCGCACGTACACGTATAGCAAGGCGTGCTGTGAACTACGACAATAACCT
AAGAGCAGGTGGCTTTTGAGTGATCTATACTGGCAAAAGTATCAAATTCCGTGACCGAAT
TTTTTTCTTTCAAACTTAAAACAAATAATAATTTTCGGGAACACGTCAAGGAACGAATAT
TATATGAAATGAATGAAATGATATGAATATTACAACACTACTATTTAACAGTGAGGTCCT
CATATAGCCAATTAAATTTTATTCTATTATTTAATGCGTGGTTACGAATTATCATTATTG
TAGCGGTCGAATTTTATTTTATTTAAAAGTAAGTAAATTATACCTTAGCCTTTAATGGTT
GGTTGGTTGGTTCAACGAAGAGGGAATTAATTGAAATAAGAATAAAATTAATGTAACATT
ATAATAATCCATTAGTTAAGCGTTTGTTTATTATCTGTGATACTATTTCTCAGACAATGT
AATTTTGTAACGGTCATTTTAAATAGAATTTTTAGATTTATACAGAATAAATACATTTGT
TTAAAATGCAGCGTCAAATAA
(1701 bp)

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