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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14535_c0_seq2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737452_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071837 F HMG box domain binding
Transcript
Level		FPKM:1.77 TPM:1.91
ORF EntryO_BomoOtmSK13032_complete:A_BomoOtmSK_comp14535_c0_seq2
Sequence
(Nucleotide)
GGTTTTGCAAGATGTATGAGTAACCAATGACCGCAGGGCATCCCTGCGCGGTGGCGGGGC
GGGGAGAAGGGGGGTGATCGGATCGGTTCGCCGAATTCGCCGACAGCCGACAGCGTTGCA
CTGAGTTTTTGCCTCATCTTGCACCGTAATAAAAATGACTAGTACAGACATCGCGGAGAA
GATGCCGCTCAATCAAGAAAAACGTTCGAACATAACTGTTTCTAATAACAATGACCACAA
CTACCTTCACAAGAAATTTAAAAAAATGGCATCTACTATACCCGTTCTACCATCAAATCA
GTCAAGAGGTCAGGAAATTAGACAAAAAGAAATAAACGTGATACAGAATGCATCTAATGC
TCCGATAACAAATGGAAGCATTTCTGCAGCACATCCTGAAATTGAAAAAATTAAAGAAAA
ACAACACAGGCAGCACGTAGATGCGGGTGAAAATAATGTACAAATTAATTATAATGATGA
AAATAGTAAGTTAGATAATGTAAATACTGTTCAACTATCTGGTCAAACCAGTTTGACAGA
TGAATTTTTAAACAAGACTGAGAACCTTGAAAATGATTTTATCAGGGATGCCTATAATGG
CACAGTAGGCGGGCGATATATATGCCCATATTGTAAATTATCTTGTGCCAAGCCTTCAGT
TCTTCAAAAACATATCAGAGCACATACTAACGAGAGACCCTATCCATGTATACCTTGTGG
ATTTGCCTTTAAGACAAAATCAAATTTATACAAACATTGCCGATCACGTATGCATGCGTT
AAGGTTACAAGGAACAGATATACCTATGACTCTAAATGACGACGAAATGTCAGGGGGGTC
CGAGAGTGACACTCCTACCTCTATCTCTGAAGCAGGGTCAGACGTTTCGAATTGTCGAAT
AGAAACGTTGGACTATAAGCCTGAACCCGAACGGCTTACGGATATAACACAACTCCGCTA
CACAAATACATCTCCAAGTGAGACCAGTAAATCGAAGACAATTTATAAACCTAAATTTAG
AGCTGGAGTTGCGTTTTACCGTGAAAGCGATGAGAAAGAAAAATTAAAGAAATCAATATC
ACCAAATGCAGATTTTCTCAACGAACATATCTCTAAAATTATATCAGACAACGAAGCTAT
AATTGATGTTATAGAAACACCATTACAAAAAAAATATGGTAAAATCAAACAAATAGCAGA
AAGTAAACAACTTATGAATGACATTAACGAAATAAAGTCGGATTCGTCTCCCTTGAATCT
GACAAAAAACAATAATGAAACAGAAGTTTCGTTCAGGAAAAGATCCCATTCTGAAAGTTT
TTCACAGGGTCATTTTCAAAAACACCCTTTGAATCCTGAGGGATCTATAATAAAAGATCT
CCTCTTAAAAACGAAAATGGACGGAATGGTGCCAATTACTGGAGAACTGCTCGAAGGTCC
CCTATTTCTTTGCCCTGTTTGTCAAATAATGTACAGAAGTGCAGATAATTTAGAAATTCA
TAGGCTGTATTATTGTAAAGGTAACGTTAACAGTAATGTAGTCAGTGACAGTAAAGATCT
AAAAGTTATAAGAACTGACAATATTTTTGTAAGAAGTAATTCTGTTAATGTGCGATTACC
TGAAAGTAGTTCAAGTGCTATTCAAAAATCAGGCATAAATTCAAAATCAGCACCAGCTCG
ATTAAAACCAGAGAACCTCGTTATCACGAAGGCAGAATGCAATGATGTGGTAGCTCCTTT
GCCATCACCAGGTCCTTTACTCGGCAACACCCGACTTGTGGACTCAAGAATACCATCTGA
ATTTGCTAGAAAAAACGACGTTATAAAATCAAAACCTATAGCAAGTCCAAAAAGGAAAAT
TGATAGTCATTCTGATGCATACAGTCCAAGATTAGTAGAAAACGTATCACCAAGATCTAC
TGACTTGTATTCTCACCCAAAATTGAGATGCGTAGAAACAAATTCGAATAATTTACGTTC
GATCGAAGAAATTTCACCTAATTTAAGAATTAATTCAACATCCCTTCAAATGTTTGGTGG
TGAAGTGAAGATAGTAGACCATTCTGGGAGCACTACAACATTGCGTATTGAACCAAATAA
AAACCAATTGTCACCTATAATGATTCAGACAAACTTGTCGCCATCGAAGCTTATTAGTGA
CATTGAAGCAAGTAGTGTTGTAGTTAGATCTGGTTTGCATTCAGGCGGGACAATCGTTCA
TAATCCTCCAACACCGAAGGAAAACTTGAGTACTCCACAGCCACAGACGCCTAGAATGAC
AATATCAACGACTGGTGTTCCAAATTCAAACTTGCCGAATATTCATGATATAACTCATTT
TCAATTTCCGCCACTCAGTGCAATTACGGCTTTTAATCCGTTAACACTGCCTCCATTGAG
TCCTTCAGCATCTGTATCACCCAACGGAGCTACGAAAATTATGCATGGAGGGAAATTGAT
CCCACACGTTCCAGGTATACCAGGACCAAATACTCCAAGTAGGTTTATAGGAAATACAAA
TACAGTTCCAAAAAATCTAGGGAATAACGATAAAACAATTTCTATACATGATGATAAACA
CTCAAACTTAGGAGCCATACACCCTATAAAAAGTCCTCACGTAATGGCGAAGTATGATAC
TCAGCAATTGCGCAATACACGAAGTCCTAATTTGAGGATACCTCACATGGAAACCGAAAA
ACATGTTCAGACACATGAACATAGTGAAGTACATTATATTTCTTCCATTCCTATTATCAA
TGTAAATAATGCTGAAGACACAAAAATATACTCCTCCAACACCATAAAACAACTCCATAG
ACAAGATGTCGGGCTGAAAAGAAACGCTGAGGGAGTTTTAAGGACACCTGTCTTGAAAGA
AAACGTTAACTTCCCAAACAATAAAAATAAAAATAAAGCACCTGGATTGTTGATCAAAAC
ATTAGATATTAAAAATGAAAAAGAAATACGTAATTTTAATTTTGAGAATTTGATAACGAA
AACTGAAATTTTCAATAACCAAGTTCCAACTTCATGCGATATTCAGAAGAATAACACACA
AGTTACAACATCGTGTGCAACTCCGCAAAATGAAAGGTCGGAGCCTTTATATTTTCAAAA
GAACATAATGGTAAAGTCTGCTAACGGTGAAAGAAAACCAAAATTTTTGAGGCCGTCTAC
GTTGCCTTTAAAGCCTGGGACGTTTACACCAAAAAGACATCACGGTATTACACCAAATGC
AAATACTATGCCCTTGGTATCACCCGAAACTCCCAGACCAGCCAAGGCCTATGGGCAGTT
GTACCTTAACGGAAATGCGTATACGTACTTGGGCCTGAAATGTTCAACTAAGGTTTTTTA
TTGCACCATCAACAGACCTCAACCAACTTACGTTCCAAATCAACATTTTCTTTCCATGTA
CAGTAATTGGCAGTTATTATCAGAATTGACACCAGATCCATTAGGGTTGTCGGCGTCTTC
AGCTATGTCTTTATACGATTCTCGACATCGACCACAAAATATGTCAGTAGCAGTAATTAA
GCACGATCTTATTTTAACACACTCATCACAATGGAATACATTTATAAAAGAAAAGAAACA
GGTGCTCCAGTCACTAGATGTAAAAAAGATAGAGGAAAATAAGTCTCAAATTATGTCAGA
GTCTGAAAACTTGATGACTCCCAAAAAAGAGTTGACTGGTGGCTTTGAAAGTAATGAAGA
GTACACATATGTTCGGGGGCGTGGGAGAGGACGTTACGTCTGCTCCGAATGCGGTATTAG
ATGCAAGAAACCATCCATGTTAAAGAAGCATATTCGCACTCACACCGACGTGAGGCCTTA
CACATGCGTGCATTGCGCTTTCAGCTTTAAAACTAAGGGCAATTTAACTAAACATATGAA
AAGCAAAGCTCATTACAAAAAGTGTTGTGAGTTGGGTATAAATCCAAATGAAGGTGATTG
TGACACTAATGAAATGGCCCAATGCTCTGGTGAAACAGATGACGACACTGATTCAGATGG
AGATGAAGGAAATGAGGGTGAAACTGAATCCAGTGATACGGAAGCATATAAATCTCGTTT
ACCGGAACATGAAGCTGCACATTGCTTGTTGTCTTTAGGTGGTAACAGACCTTCTACGTC
AGCTACTCCGGGTTTATTAACAAGTGCTAGACCAACAACGTATCCTTACGCACCCGTGGG
ATTGGAATGTGTCGAAATATACACAGAACAGGTTAGGGATTCATCTGTTGATGTGAGAGT
TGATGCAGAAAATGAACCTATTGATCTCAGTAAAAATGATGTGAAAACACCTAACATTCC
TGAAATTCCAACTGCAAGAGAATCAAGTGTTTTAGCTTCTTTGGCTTCAAATACCGCTAA
GCTCCCTCAAGCTCCGAATCAATGGACAAATGGGGAACCTTTGCTACACACATATTTGAC
CGAAAGAGCTTTATTAGATACAAAAATAAAGCAAAGTCAAGTTACGAGTTGCCTAAGCAA
ACATAAAAATATCGATTTAGAAAAATCTGCGTTCACGGATGATGCAGTAGAAAATCAAAA
TAACACAGAAAAAGTAAAATCTTTACATTATATTAAAAATAATGATAGAGTAAGAAATAC
AAATGAATGTGACGAAATTGAAAATAACATATCCTCCGTGGCACTTAACGATATGGTAAT
TGATACAAAAGATTCTACCATAATGGACAGCAATGTACCAATTGATATGAAAAAGTCGTT
TGTGCAGAATAGTACAAATTCTAACGCAGAAAATGCAAAACACGTAGTGTCCGAATATTT
AAAACAAGCAAAGATTAATCTCATCAAAGCGCAAGAGGATATGTCAATTAATCAATCAGA
AAACTTCGGTGAAGAAAAAAATGGCGATGATATCTTAAAATCTGATGAATTTTCAGATTC
AGAAACCATGAAGTCATCATCGATATTGGAACATGATTCTGTTGCGACAAAAGTCGTAAT
TGGTGTGGGTGGCGTGGCTTTTAAGGTTACTAAAGGCAAAGAACTTGAAAGTTCTTCATA
TCCCCCTGGCAGAATCATGGAAGACGGATGCAGAGATTGCAATTTTTGTAATAAGACATT
TACGAAACCTTCACAGCTACGGTTGCATCTAAATATTCATTACATGGAAAGGCCCTTTAG
ATGTAGTATATGTGCCGTGAGCTTTCGCACACGGGGTCATTTACAAAAACACGAACGGTC
TGCTTCACATCACAACAAAATATCAATGACTTCAACATTCGGGGCAGCAACGTCGTTTAA
TCCCAGACCGTTTAGATGCTCCGACTGTAATATAGCGTTCCGAATTCATGGACATCTTGC
TAAACACTTAAGAAGTAAAATGCATGTTATGCGTTTAGAGTGTTTGTTTAAATTACCTTT
TGGTACATTCACCGAGATTGAACGCGCCGGTGTTAGTTTGACAGATATAGACACAACAGA
TTGTGATAGTTCGCTGGCTAGCTTGCAATTGCTCGCAAGGAAGCTTCACGAAAAAGATCC
AACAAAATTGGAATATCGAGATCCTAACGGTCTGACAATAGTAGAACTACCTGCAGGCAG
GGAACTGTCGGAAGACGAAGATAACACACCCGCCGATAACGCATGTGTTAGTGAAAAAAA
CAGTAATGGAAAAACAAGTGAAGGTAATGAAGATCAAGAAATGGAAACACGTGTTAACTG
TAGTGCCACAGATATTTAGTGCCAAAATTATATTACGTACATAGTGTATTTTAATGTGCA
GTTTTATTTTGTTTTTAATTTAAGTGTAATTATTAAAGCTGGGGTTACTCAGATTCGTGT
GAAAACAATTGTACGCTTTAAGATTGTAACATACTCTAACATTAAAAAATCGAAAAATAT
TAAATATGTATCTTGTAAATATCTCCACGTAATATTAAATTTGTTAAATTTGCTTTTAAT
GTAAGTCTTATTATGTATTAATACTGTTATTTGTAATTTCTACAGAGATAATATTTGTTG
AATTGTATTTGAAAACAAAGACCTAGATGGGATATATTATTGCGACAGAAAAAAAAAGAG
GTCCACATTTTTTAAACTACGCTTAAATATCAGTCAAACATATTAACATTGTCATAGGAG
TAGTCGGACGATATATAGAATAGAACAGCACTTTTGTATGAATTTTTGTATGACATATTT
ACCACTTCATATTTATACTATGTAACTACTACTTCCATAAATTTAAAACAATTGGCATAT
CAACTTCCATACACTAAACGTAGATATGAATAGAAAACAAAAATGTCT
(6288 bp)

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