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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14487_c0_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101737811_isoform_X1_[Bombyx_mori]
Ontology
GO:0000149 F SNARE binding
GO:0000323 C lytic vacuole
GO:0000775 C chromosome, centromeric region
GO:0005515 F protein binding
GO:0005694 C chromosome
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005813 C centrosome
GO:0006281 P DNA repair
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006914 P autophagy
GO:0006974 P cellular response to DNA damage stimulus
GO:0007051 P spindle organization
GO:0007059 P chromosome segregation
GO:0010508 P positive regulation of autophagy
GO:0017124 F SH3 domain binding
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0032801 P receptor catabolic process
GO:0035493 P SNARE complex assembly
GO:0043234 C protein-containing complex
GO:0045335 C phagocytic vesicle
GO:0046718 P viral entry into host cell
GO:0051297 P centrosome cycle
GO:0051684 P maintenance of Golgi location
GO:0060627 P regulation of vesicle-mediated transport
GO:0070418 C DNA-dependent protein kinase complex
GO:0071900 P regulation of protein serine/threonine kinase activity
GO:0097680 P double-strand break repair via classical nonhomologous end joining
Transcript
Level		FPKM:2.72 TPM:2.94
ORF EntryO_BomoOtmSK12926_complete:A_BomoOtmSK_comp14487_c0_seq1
Sequence
(Nucleotide)
ATGAGTTCTGTCTCATGCGAGGTTCAGGTCATGCGACAGGAGGTTTTAGTCGGTTCAACT
CCGACATACCCCGCCCTCCATCCCCAGTGGAGGGCGGAAGTCCGGTGATTTCCTCCTGAC
AAAAAAAGGCTCTTGATATATTATTATATGTTTACGTACAAACTGCTATAATACGACCAA
TTTACATGGACCGATCATATATATTAATATTACCTTTATTATGGGTCTATTAAATCGGTT
ATGGCTTTTATAATCCGACTAAATATCAAAATGAGGTGCATTCGAATTGTTTTATTTATA
CTACGATAATTTTAATTCGGTCGTATTTTATAATAATATCCTTATGAAAAATCAGCAATT
AATCTATATTATTTGCTTCTGAAGTCGAGTAATGTTGAAATACTTTTTTAGGATATGTAT
TATCTGACACGAAAAGGGATAATTAGTGAAAATCATCCTTAAGAGATGGTCAATTTATAT
TAAATTTAAAACAATTTAATTTTAACAATAACTTGAAAACTACTATATAAATAGTAATAA
AATAAACACGCTGTATATTTTTAACATAACCTCTTCAAATTATCTTCGTAATAAGCGACG
CTGTTTGAGTCAATTAAGTAACCTTAACAACCCACAAACATAAATTTAGTTACAAAGACC
ATATTATACGACTTAAATTATAAAAAAAAAAACAATTCAAACCTTTTTTTTATTTTGCAT
TCATCAACAACAACACATTTGGCTAAACAACAAAAAAAAACTGTCCAATCGTATACATTC
AAACTAATTGACGCGGGCTGTCAATCTGTCAATCGTTGTGCCTGTCACTTTGACAGCTCT
GCCCCGTGTCCAAGATGGCCTCGGCGCTGGGTATGACGATGACGTCCCTAACATTGTTCG
CACAGACTATATCACATTCGCCGTTTTCATTCCTAACGCAATCACTACAATCCAGGTCCT
CTATATCACTGGCGCGCCTCTCCATGTACTCTGCTATGTCAATGGCGTTTGACGAGCAAA
AATCATTAATTTCGTTGCATATTTTCTTTACATTATCACTCAGTTCCACGTCACCGTTGT
TACTCGTGAGCCTGACCAGCTTCTCGCCGTCGCCTATAATGAAACTGACATTGACAGCTC
CGTCCGCAGTGACATTGACAGCTCCGTCGGCACTGACGTTGACAGCGTTGTCCGTCAGCG
TCGGAATGGCGGAATCGGAGCTGTGAGTTTTGAGAGTCGACGCCGCCTCAGAGTTGCCCT
GGGACAGCTTCATGTTGTAAATGTTCGATTCGCTTCCCATTATCGATGTAGTGGATTGAT
CGAACGTCGGTGTTTCTTGGTCGTCCCGATAGCTACCGACGCTCTTCGAGTGGCGATGTC
TCCGGAGGGTCGTGGCGGAATGTGGCGAGTGACCATCCAACGAATCCTTGAACCTATTAA
ACGGCCTGTACTTCCCTCGGTCGGACGCGACCATACTGCGTAAGGATTGGGCGCGCGGAC
AGTCACCGTCCGACAGCCAACGGTTACTACCAAACAGCTTCGACGACTCAGACATATTAC
ATGGTGTTATCAAGAGCCTCTGCAGGTTCGCTAGGGTCGGTCCTATGTCCGTGACGGGCA
GCCCTCGACCCCACATCAGCTGGGCTATGCACTTGTTGAGCAGGAATAGCGCGTACCGGA
ACAGCGTGGTGTCGCCGCCACGAGCGAACAGCGGGATGTTTGGATCTGGGAGATCGGGTG
TTTCGTCCAGTATCTTGCTGGCGGATCCGAGGAGGGTTATCTTGTAGCGCAGGGGCTGGT
TGAGCAGGGAGGCGGCCAGACACGTGGCCTGCGCTACGAACCCCGCCGCCACGGAGTCGC
TCACGGGGGTCGCTCGGGTGCTCTCGTCCCCGCATATGGGCAACGGAACGTTTACTATTG
ACCATTTCGATGGGCCTCTCTCTTCGACGTAGAATATGTGGTGCAGCATCAGCAACAGCT
CGCATCGCCTGTTCCTCAAGGCCGAGTGCGAGCGACCGGCCAGCTCCCGCAGAGCCCCGC
AGTTCTGTCTCGTCTCCTTGAGCGAATCCGTGCGTCGCGATAACGTGTGATAGTTCTCCA
TTAATTCCGAACCAACATCCTGATTCGCCTCGGACAATTTAGCGTGCCTCTCTTTCAGTC
TCCTTATGTTCGCTAGCTTGCTGTCTCTTTCGTCTGATAGTATTATACGTTTAAATCTTA
ATATCTCTATTTGTTTCGTCAGTCTCACGTGTTCGGCCCTTTGAAATGGAGATGGCTTTG
TCTTATAAGATAGGAGATCGTTCAGTTTCAAAGTAAGTCTAGGTCCGTTTGACAGCGGCC
TTTCTTCTTTGATCCTACCATTTTTAACATTCAAATCGCTTTGTGACGCCGATTTTTCTC
TATTCAAACTATTATCGTCCGGACTAAACAGATTTCTTTGCGATCTACTCTTGCCGCGCA
ACAAGAACTCTTTCTCGTCAGACGGGGACCGGCCGTCGGTCAGGGCGGACTTCTTGTAGA
TCCTCTCCTTGATCTCTTCGACCGCCTCTTGCTTCTTCTTTATCGAATACTGCAACAGAT
GCAGCTTCTGCAGCTTCGTCGCGTTGTAGCTCGGCCTGATCTCCGATTTCAAGAAATTCA
TGGTCATGTATCGGATTTTCGGGATGCCGTCCAATTCGTTTCGCAGGTCGTAATTCTCGG
CGGTTTCGCTGCAATCGATTTTACTCTGCGACAAGTCTTCGTGGGACGTTTCCTTGGAGT
AACTGTTGTATCGGTCCTCTGTGAATTCTTTAACGTCCATGTAATCAGGTGAATACTCAT
AAATATTACTCGGATTCTCTTTACGTCTACCTATTTCAACATTATTATCCCTTAATCTAT
TTTGGGTGATAATCAAACTGGCCGACGGTCGTATTGTTGGAAAGTTCTGATGAAACGTCT
TTTCTATTGGACTGTGGCTTTTCGAGTACTCTTTATCCGGTTTCCTGCCGCGTTTACCGG
GCGATATAGATCTCGCATGGAGTAATTTAGAATCCGAAACCAATCTCGATTCTAAAGTAG
TTCTCGATAGATTCGTTCGTCCCGACGAATCCGATGACAGCGACCCCTGATCCAATTCAT
TCTCCGGGGGGATAACGTCTAACTTGAGACTTTTGTACGAGCAAAAATGACCACCGTGCA
TTTGAAACACCAGCGTGTTGCATTTGAAGCAGTCGGACGTGAAATTCGAGGCTAAATTCG
CCCCTATATATCGGAGGCCGCTAAAATAAACCCCCCAAGTCTGTATAACCGTATCTTGTG
TGTTATTACAACTCTCCGTGGGGTGTAATGTGTGACACCATATCCTTATAACAACGTTCG
TTGATGACATATTATGAGTTATTTCAGAGTCGATCTCTTTCCATTTCGGATGCGGCGAGC
ATATCCTCTCGCTGGTGTAAAACGGGGCAGACATGGTGGTGTGATGCAGGGTTAAGTAGA
AGCTGCACTGGACCGGGTAAGATTCAGGTGGTCGTATATTGTAGCCGACGATCTGAATTA
GGCTTCTTAAGCGTAGCTGTTGTGTAGAAAGTGGAGTCCACTCCCTACATCTCGGTCTTC
CGAACATTGTTCAACAATAAAATTAACAAAAATAATAGTTTACACAACAGCAAAAAGTAC
TCTGTAACTTGCTAACAACACAAAATTATAAGCTTCACGCATTTTATGTATTATAACAGA
TTATTTATTTACAAGTAGTATTAATAATTAAAATTAATTCCCTTTTCACAGAAATAAACA
AAAAATGC
(3788 bp)

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