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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14484_c0_seq2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		structural_maintenance_of_chromosomes_protein_1A_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007126 P meiotic cell cycle
GO:0008280 C cohesin complex
GO:0009314 P response to radiation
GO:0019827 P stem cell population maintenance
GO:0030893 C meiotic cohesin complex
GO:0032876 P negative regulation of DNA endoreduplication
GO:0036033 F mediator complex binding
GO:0042770 P signal transduction in response to DNA damage
GO:0044822 F RNA binding
GO:0046982 F protein heterodimerization activity
GO:0051276 P chromosome organization
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
Transcript
Level		FPKM:11.63 TPM:12.54
ORF EntryO_BomoOtmSK12922_complete:A_BomoOtmSK_comp14484_c0_seq2
Sequence
(Nucleotide)
TGACATTTGTACAAACAATTCGTGATTATGTTTGGCGCTTGTTAATTTGTGTTGTGAATT
AAAAGCATTACAGTATTGCATGGGAGTTTGTCTTAATCAAGATGCCTGCGTTTCTTAAAT
ATATCGATATGGAAAATTTCAAGACCTATAGAGGACATCACCGCATAGGTCCTCTGAAGT
CTTTTACCGCTGTTGTTGGCCCTAATGGATCAGGAAAGTCCAACTTCATGGACGCTGTGA
GCTTTGTGATGGGTGAGAAGACATCATTGTTGCGTGTGAAGAGGTTGAGTGACTTGATCC
ATGGTGCTTCAATCAACAAACCTGTTTCTCGAAGTGCATCTGTTACTGCAACGTTTGTTC
TGGAAGACATGACTGAGAAACATTTCCAGAGATCAGTGATTGGACAATCGTCTGAACATA
AAATTGATGGCCAGTCTGTATCAGTAAGTAACTATCTTGGTGAACTAGAGAAATTGGGCA
TCAATGTGAAAGCCAAGAACTTCCTAGTCTTCCAGGGTGCCGTCGAGAGCATTGCCATGA
AGAATCCTAAAGAAAGGACTACTCTGTTTGAGGAGATCAGCGGGTCTGGAGTGTTAAAGG
AACAGTATGAAGCTTGCCGTGCTGAAGTAAACCGAGCTGATGAGGAGGCTCAATTCTCCT
ATCAGAAAAAGAAGGGAGTGGCAGCTGAGAGGAAAGAAGCAAAGTTTGAGAAGGAAGAAG
CGGAGAAATACACAAGACTTAAGCAAGAATTGCAAGAGCAAAAAGTGGAACTTCAACTTT
TCCATCTGTATCACAACGAGAGAGAGATCCAGGCTTATGAAGAAGATTTGCAACACAAAC
AACAAGAATTAGCAAAAATTGAGAAGAAAAGACAGAAGGCTGAAGAAGCATTAAAGGAAA
AGAAAAAAGAAGCCGGAACCGTACAGAGAGAGCTCGCAAAGATTGAACAGGACATTAGGG
AAGTGGAAGCGGAGATTTCAAAAAAACGACCAACCTTCATAAAAGCAAAAGAACGAGTCA
CTCACACTCAGAAGAAGCTTGAAAGTGCTCAAAAGACATTAGAACAAGCGCGGAAAGCTC
ATGAGGCCCATCAGGATGACATCAGGACTTTGGAGGAGGAGCTTAGAACCTTGGAGCAGC
AAAAGGCAACATGGGAAACAGCTAGTGGTACCGGTCACAGTGGGAAGGCTGATGTACATT
TGGAGGAGGCCCAGATCCGTGAATATGAAGAGCTGAAGATGGAAGCATCCCGTCAGGCAG
CTCGCTACCTCCAGGAACTGGATTCCGTGAATAGGGAACAGAAGGCAGACCAGGATCGTC
TGGACAATGAGCTGAGGAAGAAGGGAGAGCTGGAAAACAAGCATCGGCAGAAGGGGCACG
AGAGAAACGAAGCTGTGAAGAGAGTGGACAAACTAAATGAACACATCAAGAGTTCGGAAC
AGGCTCTTGAGGAACAGAGGAGACTACGAGCTGAGTTACAGGCGGACGTGGGTTCGTGCC
GCGGGCGGGCCGCCAGCCTGCAGACGCAGCTGGAGGACGTGGCGGCGCAGCTGGGCGACG
CGCGCGTGGACAAGCACGAGGAGGCGCGCCGCAGGAAGAAGCAGGAGATCGTCGAGAGCT
TCAAGCGAGACATCCCCGGGGTTTACGACAGAATGATCAACATGTGCCAGCCGACCCACA
AGAGGTACAACGTGGCCATCACCAAGGTCCTCGGGAAGTACATGGAAGCTATTGTGGTGG
ACACCGAGAAGACAGCCCGGAGGTGTATCCAGGTGCTGAAAGAAAGAATGCTGGAACCAG
AGACTTTCCTCCCCCTGGACTACATACAGGCTAAACCGCTGCGGGAGAGACTGAGAGACA
TAAAGGAGCCCAAGAACGTGAAGCTGCTGTTCGACGTGCTCCGCTTCGAGCCGGCCGCCA
TCCACCGCGCCGTGCTCTTCGTCACCAACAACGCGCTCGTGTGCGAGACCCCCGAGGACG
CGTCGCGCGTCGCCTACGACCTCGACCGGAACAAGAACAGCAGATACGATGCGCTGGCGC
TGGACGGCACGTTTTACCAGAAGTCTGGCATCATATCGGGAGGCTCGTTGGACCTGGCGA
GGAAAGCTAAACGATGGGACGAGAAGCATCTTTCACAGCTTAAAGCTAAAAAGGAGAAGC
TAACAGAAGAGCTGCGGGAATCGATGAAAAAGTCCCGCAAGGAGTCGGAGCTGACCACCG
TGGACTCGCAGATCCGGGGGCTCGAGTCCAGACTCAAGTACGCCGTCACCGACAGGGACA
CCACCTTAAAACAAATTAAGACGTTGGATGCTGAGATCGTTGAGCTGGAGCGAAAGATGG
AAACTTTTGGGCCTCAGATCGAGGAGATCGAGCGCACCATCCGGCTGCGCGACGCCAAGA
TCCAGGAGGTGAAGGAGAACATGAACAACGTGGAGGACGTCGTGTTCAAGGCGTTCTGTC
GGGACATCGGCGTCGCCAACATCCGACAGTACGAGGAGCGCGAGCTGCGCGCCCAGCAGG
AGCGCGCTAAGCGGCGGATGGAGTTTGAAGCGCAAATCGACAGGGTCGCCTCCAACCTGG
AGTTCGAGCGATCCCGGGACACGCAGAAGAACGTGACGCGGTGGGAGCGCGCGGTGCAGG
ACGCCGAGGACGAGCTGGAGGGCGGGCGCCAGGCGGAGGCCAAGCAGCGCGCCGACATCG
ACCACGAGCTGCGCCGCGCCGACACGCTCAAGGCGGACCGAGCCGCCGCGCGCACGCACC
TCGAGAAGGCGGAGGAGGACGTCAACAAGGCGCGGAAAGAGGTGTCCAGCATCCAGAAGG
ACATCCAGAGCGTCCAGAAGCAGATGGCCAGCATCGAGGCGCGCATCGAGAGCAAGCGCA
GCGAGCGACACAACATACTGCGGCAGTGCAAGATCGATGACATAATAATACCCTTATTGG
AGGGTAGTCTAGACGACACGGCCGACACGGAGTCCGACCCCTCCTCCATGTCCACCACGC
AGCAGTACAGGAAGGAATCCAGGATTCGCGTGGACTACAGCATGCTGTCGGACAGCCTGC
GCGACCTGGAGGAGGCCGACGAGGTCCGGCGCCGCGCGGACAAGCTGCAGAAGGCGATCA
ACTCCCTGCAGACGACCGTCGACAAAATCCAGGCGCCCAACATGCGGGCCATGCAGAAGC
TGACGGAGGTGCGGGAGAAGGTGAACGCTACCAACGAGGCCTTCGTGGCGGCGAGGAAGC
GCGCGCACCGGGCCAAGCTCGCCTTCGAGAAGGTTAAGAAGGAGCGCCACGACAAGTTCA
TGGACTGCTTCGAGCACGTCGCCAACGAGATCGACGCCATCTACAAGGCGCTGGCGATGA
ACCAGTCGGCGCAGGCGTTCCTGGGTCCCGAGAACCCCGAGGAGCCGTACCTGGACGGCA
TCAACTACAACTGCGTGGCGCCCGGGAAGCGCTTCCAGCCCATGTCCAACCTCTCCGGCG
GGGAGAAGACGGTGGCCGCGCTGGCGCTGCTCTTCGCCATCCACAGCTACCAGCCGGCGC
CGTTCTTCCTGCTGGACGAGATAGACGCGGCCCTGGACAACACCAACATAGGCAAGGTCG
CCTCCTACATCCGCTCCAAGAAGGGCTGTCTGCAGACCATCGTCATCTCGCTCAAGGAGG
AGTTCTACGGGTGCGCCGATGCGCTGGTCGGCATCTGCTCGGAGCCGGCGGACTGCCTCG
TGAGTGACGTCATCACCCTCAGCCTGGAGAACTACGCAGATTAGGTCAAGGAACGGAACA
AGCTCTTTATATTCTCATTCCTTTAAGATTTTAATTTCAGTTGTGACGTTAATTAATATA
GGACTTGATTACATATCTTATTATATTTTGGATGATAAAAAAA
(3883 bp)

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