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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14475_c1_seq4
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_1-like_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035327 C euchromatin
GO:0045292 P mRNA cis splicing, via spliceosome
Transcript
Level		FPKM:41.30 TPM:44.53
ORF EntryO_BomoOtmSK12900_complete:A_BomoOtmSK_comp14475_c1_seq4
Sequence
(Nucleotide)
GTCAAACGTGGAGACGAAAGGTTGTGGCGAGCAATAAAAAATTAAATTTAGTGAAATATT
GTGAATAATTTTTATCCACCCTTTTCAATCAAAACTAAGATGTCTCGCTACAGAGAATGG
GATCTTTCTTGCAAAGTGTACGTGGGCAACTTGGGTACTAATGCGTCTAAATATGAAATA
GAAAAAATATTTTCTAAATACGGTAACATACGTAACGTATGGGTAGCTCGAAATCCGCCC
GGATTTGCATTTGTAGAATTCGAAGACCCCCGTGATGCTGAAGACTCTGTTCGTGGACTT
GATGGAACACGCTGCTGTGGCACCAGGATTCGTGTCGAAATGTCAAATGGTCGCACAAGG
AGAGACCGCAGCAGGTCACGCAGTCGTAGTCCCCGCCGCCGATCATACTCTCGCGGCCGG
TCAATGTCTCCACGACGGTCGCCTTCAGTTCGCCGTCGCTCTCCTTCTCCCCGCCGTTCA
CGATCACGCGACCGTCGCAGTCGTTCTGACAGCAAAACCAGGTATTGAGAAGTTGTGCAG
ATTTTAGAAGAACAATGTGAAAGACTTATAGTTTTAAGCGTGTACATGTGAAAATGCGTG
TGGAGTAATTTGTATACTATTGCTAATAATAATGCAACCTGCATTAGCTGTCTTTGAAAA
CATAAGTCTAAAACTTTTATAAGTGTTTAGATCACTCACTTCATTAATTTTAAGGAATTA
AAATACATATTTTACTTCATAGATATTATTAAGATGACTTAAATATAATTTTGATGTAAA
TTTTTAGTTTTATTTTTAATTTAAAATGTTATCAAGATAACAATTATAGTTATGAAATTA
AACTTATCAGAATGTTTTCTTCATCAGCGAAGTCTTAATGACAACAAA
(888 bp)

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