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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14456_c0_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		nuclear_pore_complex_protein_Nup153_isoform_X1_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0005719 C euchromatin
GO:0005813 C centrosome
GO:0006325 P chromatin organization
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006606 P protein import into nucleus
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0006999 P nuclear pore organization
GO:0007184 P regulation of SMAD protein signal transduction
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016568 P chromatin organization
GO:0017056 F structural constituent of nuclear pore
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031490 F chromatin DNA binding
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0034401 P obsolete chromatin organization involved in regulation of transcription
GO:0044613 C nuclear pore central transport channel
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051028 P mRNA transport
GO:0051298 P centrosome duplication
GO:0072686 C mitotic spindle
Transcript
Level		FPKM:3.42 TPM:3.69
ORF EntryO_BomoOtmSK12867_complete:A_BomoOtmSK_comp14456_c0_seq1
Sequence
(Nucleotide)
CCAGCGGATGGATAGTTTTGGTTAATATTCTTCAAATTCATCCAATTTTGCGTTAAATTT
ATTATTAGTGAATTCAAATATAAATAAGTTTTATTGGTGGCGAGTGACATTCATGTTTTG
TGATTATTACGTCCCACAAAGAGCCGTGAAAATTTGTTAGACCTCCCGTTGAGCACAGCA
TTTAATCTGACACTTTTAACGACGCCATGTTTGTCACGTTTTTGCCAGTTATGAATAAAT
TTAGTCAGAAATTAGATCTTTAATACGATACATTGAAAGTATTCATCAGTGCTGTAAGTT
GATAAAAAATGAGTATGGTGTTTTCAAGAAGCAAGGAAAAGAGAACGCGTTCTTCTACTG
GCAATTCTAACAGCTCATTCGTGAAAAATGTGACAGCAAGAATGTCAGGCTTATTGCCAA
GTACCATTACTAAATGGTTTAGTAGTCCTAGTACGTCAAATGCTAATGGAGCAACACCAA
CAGCTGATGTCACAGACTCTTCCACTGAAGATGAATCACCAGAAAGTCCTGTCAGCACTC
AGCCTCCAGCAAAACGCATGCGATTTAGTACTCCTGGAAAATACAATCAATTTGGTTCTG
CAGATGGGAATTCTGTGCTGACTACAGTTGAAGCCAATTCACAATGCTCCTCAACCTTTA
GCATTATACAGTCAACACCTGGGCGAAATACATTTCGACAAAATACTAACTTTATGTCGC
CACAGACTTCTAGTACAATTCGTTCCATAGATGATTCCAATGTGGATAGAAAGGATACAA
GTTCTTCCTCAGTATTTAAAAAACAGCACACACTTTCAACAATTGGTCATTCTGTAGCTG
TGAAGAGGAAATCTATATTTGAATTATCTACTAATAATAGTGAGACTGCACAAGCAAATT
CTATGAAAACTGTCCATAAAGATAGAAATCCATCATTCAAAGCTAGTCTCCTTGGTTCGC
CTTTTTACTCAGGACGAACCGTGTATGGGGGTGCTTCTTCATCCTACATGAATCAGCCCA
ATATTAAACAAAGAAAAGTCGCTCATATAAATGAATCTCCAGCTAATGAGACAGTAACAA
TGAGTAATTCTGCGAGAAAGATAATGGACCTTCTTGAACAATATTCCTCTCCATTGGCGG
AAGCGAAAAGAATCCCACGATATCAGAAGTCACCTAGAAATGAGAGTATAAATAGTACCG
CAAATACAATTAAACCAGCTGCCTACCGAACTCAAGAACTGCACATTCCAAGTATAGCTT
CAATTTTACGAGTGAAACAGAAATCTCGCTTAATGGACTCAACAAGTGCTGCACGACAAC
TTATTGCCTCACATAGTAGTGCCGCGCCAGAGTTTAGCCCTTATCCAACAACCATTACAC
AAAAGGAATTAGCTGTTAACGAACAAAACAGCAATTTGACAACAAAAGTAAAGACTAGAT
TAACAAGACCAAATAGAGGCGATAAGTTCGATGATGTTTTGACTCCAGTTCAACTGCCAA
CAGGAGTTTTGCAAATTGATAAAAATAATATGCCTAAATTTACCTTAGGCAAACCATTTT
CCTCAACGCCCAACTTAATATCTACATCTACGCCTGCTGCATCAGTGAACAAATTGGTTG
TAGCCCAAAATACAAACCCCCTTTCTGGAACCACTACAAGTTCATCTACAGCATTTCTAA
GTAAACCTGATTTAGTAATAAGTAGCACAGAATTCAAATTTTCAAGCCCTGTAAAAGTAA
CTACAGAGAATTCAACACAAAGTGCCATACTACCCAAATTTACTTTCGGCAGTCCGGAAC
GCGGAGTAGATAAAGTTATTGCCAGCAATAAGCAAAATGACTTTCCTGTTGTAGGTGCAA
CAAAGGAATCATTTGCGCAGAAAAATATTGAAAGTTCCAAGGATTCAGTTTCAGCTTGGT
CTACAAAAGAGAATTTCATACAGAAATCTACAGACAAGGACACCACCTGGATAACAAAGG
AAACTCCAGTACAGAAAGTTAATAACAGTCTCAAAGACTCAAAACCAGAGTGGAAATGTG
CTGAATGTTGGGTACAAAACAAAGAAGATGTTGACAAGTGTGTTTGTTGTGGGGTCACAC
GGCCGTCAAGTGTTGTTGGGAAAGTGACTAAGTGTTCTTGCAAGCTTAGTGACACACAAG
CTCATATTGATAAATGTGAAACATGTGAGAAATCAGAAGCAGATGCCATCAGTATAAAAA
GTAATGAGATAACATGGAAGTGTGATGATTGTCGGGCTTTGAATGAAGCAAATATAGAAA
AATGTGTATGCTGTGGCAGTGCCCATTCTAACAAACTACCCGCACCAGTTGTATCTGAGG
CAAATGATAGTAGAAAATGGAAATGCAATGACTGTTGGGTTATGAATAAAGGAACAGCAG
TTAAATGTGAATGCTGTGGCAGTGCCAACACTAATGATACAATTTCTGAAGTGCCCCCTG
AAAAAAGAAATCCAAGTATTTCAGATGGTGATTGGAAATGTGATGACTGTTGGATTACAA
ATAAGAGCAGTGTAGAAAAATGTGCTGCTTGTGGTGGATCGAAGCCTGGCCTTAAAAATA
ATAATTCCTCACTTTTGAATGTTTCAGCATCAACTATAAATCGTAATGATTTACTTTCCA
CTGTGAATTCACAGAAAAATCTGACATGGGAATGCCAAAGTTGTTTGGTTAGGAACAATA
ATGAGAAAACATCGTGTGTCTGCTGCGGAGCTGAGCCATCTAACAATTCAGTTCCAGAGA
AAAAATCTTTTAATTTCGGGATTAATCCAAATACTTCATTTAAGTTTGGCATTAATCCTG
TTGAGCAACAAGTTAATCTAGTTAAGAAAACTGAGGAATCTAGTGCTGCTTTAAAGACAA
ATCCAGAAGTTTCTGAAAGTAACACATTGGAAAAAATTCCAATGTTTACATTTACTTTGC
CTTCTAAGAAATCTGAAGATAAAATTGATGATGTTAAAGGAAATATTGACGCCACGAAAG
TTAAGTTTTCATTTGGAATCCCAAAAGCTTCCACTGCATCAGAAGTAGGAGCTGGCAATT
CTCATGGAGAAAAAGACAAACAAGAAGAAGTGACAAAAGTAAATGTCAATACTTCAATGT
TTGAGAATCCTAAATTGGGAAATGACTTGTTAAAGCCAAGTGATAATAAACCTGCGGTTG
TAACTGCACTTCCAACAGTATCTGTAAATGAGAATAAAAATACAACTACTAATTCTTTAC
ACACACAATCTGGAGAAAAAAAGTGAAAAGGCACTGTTGAATAATACTTTCACATTCTCG
GCGGGCAGTAAAAATATTGTGACTAACATGTTTAAGAGCCCGTCTACTGTGGCTACTACT
TCAATTTCCTTTGCTTTACCAGTACAAACGACAGTGAAATCTACGGAGGCACCAGCAACT
TCGTTATTTCAACAAAAAGGATTTAACACTCCAGCATTCAAAACTGATAGTAATGCTTCT
CTATTCAAGAAGACTGAAACTGAAAAATCACCCTTTCAAAATTCAATTGCTTCGCCTGTA
TTCCAGAGTCCCACACCAAGTTCTACATTATTCCAAAAACCAGAAAATAGCACATCTTCT
ATTATGTTTCCCGCAAGTGATGTTTCTGTAGCTTCCACTGTATCATTATTTCAAAATAGT
GATAATATAATAACTACGACATCCCAACCTGCTACGGCAAATTCCCCCGTTTTTGGTTTT
ACTGCTAACTCTTTTAAACCAGCTTCGACTGCTGTAGAGAAACCCAAATTCAACTTTACT
TTGGGAAAAACTGAGAATTTCACCTTCGAAAATAAATTTTCTCCTATTGGAAACAACAGA
AATTCGACAAGTAGCTTTGCTTTACCTACAAGTACCATAATTCCTACTGTCAATGGTCTA
ACTGGAAATGCTTTAAGTGGTGGCAGCAATATGATAGGTCCTAATAATGGCAATACAATT
GGAAATACTGTTATGCCTGTTAGCAATTCTATAGGCAGTGATGTACTTAAACCTCTAGGG
TCGAGTGGTGCATTACCCGGAAATACATTGGGAGGTGGAAATGGATTACCTGCTAGTAAT
ACAGTATCAAGTGGATTCTTTGGACAATCAACTCAGAATGAAAATTTGTGGGGCACTTCA
AACAACACTTCTAATTTGTTTGCAGCAAGTACGACAGCTAATCCTTTGCAAAAACCAGCT
GCGTTTAATTTTGGTGCGCCATCATCATTATCGCCATTTAATAATAATAATACGAGTTCA
GTATTTGGCAGCAGTACGCAGTCGACGCAGAATATTTTCGGAATTGCAACACAACAGAAT
CCTGCTAGTCAACCAAATCTCTTTCCTAGCCCAGCACAGAACCAAAACGCCCCCAATATC
TTCGGTAGCCCTGTACCTCCTAGCAATTCTGTGGGACTATTTGGAACAGCAAATGTCGGT
TCTACACCAACTTTTGGAAACCAGAACCAATCTATGCCATCTTTAACACCGGCACTGACA
CCAACCTTTAATTTCGGCGCCTCACAAGCTCCAGGAGTTTTTGGATTTGGACAGCAACAG
CAGCCGCCTCAATCTCTGCAACAGCCGCAACTTCCTCAACAACAGCAGCAGCAACAGCAG
(4620 bp)

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