SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14448_c0_seq7
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_RNA-binding_protein_Luc7-like_2_isoform_X2_[Bombyx_mori]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:2.89 TPM:3.12
ORF EntryO_BomoOtmSK12830_3prime_partial:A_BomoOtmSK_comp14448_c0_seq7
Sequence
(Nucleotide)
GCCAAATTAAGGGAATCGTAGACATCGTCAGTGAAAAGATTAGTAGAAATTAGGTTGAAA
TTTTTGGATTTCACTACTGATCAGATTTATTCTATCAACTTCTGCTGTCTGATTAACTTT
AAAACATTTACAAAAGTTATTAGACTTGAAAATGTCAGCACACGAGCAAATGAGGGCTAT
GCTAGATCAGCTTATGGGCACAGCTCGAAATGGTGAAAGTGACAGACATGGGGTAAAATT
TTACGATGATTCTGTATGCAAATCATTTTTGTTGCAATGTTGTCCACATGAAATACTGTC
ATCCACCAAAATGCCCAACACTAGTCTTTATCGCTCATCACAATACTTAACAGATGAGGG
ATAGATTGTATGAGTTAGGCTGTTCTCGTATGGATTTAGGTGAGTGTCCCAAAATACATG
ATCTGGCTCTACGGGCGGACTATGAAATAGCTTCCAAGACCAAAGATTATTTCTATGACA
TTGATGCTACAGAGCACTTAGAGGCGTTTATAGCTGATTGTGATCGTCGAACTACTGCTG
CTAAGCAACGTCTGGCGGAGACACAAGAAGAACTGTCAGCAGAAGTGACGGAGAAAGCCA
ATGCTGTTCATGAATTGGCAGAGCAAATAGGGCAGAAATTGGCTCGGGCTGAGGCACTCG
GAGAAGAGGGTATGGTCGAGGAGAGTGTCAAATTAATGGGAGAGATCGACGAACTTCGCA
AAAAGAAAGCTATCGCCGAGCAAGACTATCGTAATTCCATGCCCGCTTCGTCCTACCAAC
AGCAGAAGTTACGAGTTTGCGAAGTTTGTTCAGCCTATCTTGGCATTCACGACAATGATA
GACGTTTGGCCGATCATTTTGGAGGAAAATTGCATCTCGGATTCATAACTATTCGTGAAA
AATTAACAGAATTAAAGAAAACTGTGGACAAGCGACGCGAAGAGCGCGGCGCGTCGGAGC
GCGAGCGGAGCAGCGGGCGGCGGCACTACGTGGGCGGGCGGGAGCTCGACCCCCCCTTCT
TGGCCGTCGGAGGTCT
(1036 bp)

- SilkBase 1999-2023 -