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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14448_c0_seq10
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_RNA-binding_protein_Luc7-like_2_isoform_X3_[Bombyx_mori]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:1.08 TPM:1.16
ORF EntryO_BomoOtmSK12833_3prime_partial:A_BomoOtmSK_comp14448_c0_seq10
Sequence
(Nucleotide)
AGATCTATTCATAAATTTGTAGCACTAAAAAAGTATATTTAATGTTATGCAGAATGTGTA
ACCTTTTCTATTACTTTTTAGATTTATAAATATAATTGCGAACAAAAATAATCGTAGACA
TGAGAAAAAACACTAACATGAACAATAAATCTCTAAAAGTTTTAAAAAGGTTAGAAATAA
TAATAAAAATGTAAAGCAAGAATAAGAATTTATAAAATATGAGTCATTGAATTATAATTT
TTGATCTTGAAATCTTTACTGGATTTTTATATAATGATATTTTTACATAATTAAAATCTC
AATGTATTATCTTCAAGTGGAAAATTTGCTTTCACAATTGTGATAGAGAAGTAGATAATT
GCTATACTCTTAACTGGATAGTTCTTTGTTTGAGGTGCTGTACTGCTGTTAGACCCTGGT
CTTACCTTAGAGCCAGCACTGATTGTATTGTATTATATAAATAGATGAAACAACATTATA
ATGAGATCTTAGATTCAGGGGATTTGCAGTGCTCTATGCCTTTTCACATACACTAGGATA
GTAATTTTGAAAAATTTTGGATTTAATTTATATATAATTCTCCTATTGTATGTGTTCTAC
TATCATCTGTCACTTCTATTATACAATAAAATGTTGTATTGTCACTGGAATATACTCACG
TCAGAGTGGCATTAACTGTGGTGAAATATGCTTTTCAGAAAATGCCCAACACTAGTCTTT
ATCGCTCATCACAATACTTAACAGATGAGGGATAGATTGTATGAGTTAGGCTGTTCTGTA
AGTACCCAGATGTACGTATAAAACATTTATAGTTAGCTGAATGTAATCTTACTGCTAAGC
AGGATTTAATTCAATATGGTTCTTGTCATTAAATTGTTTACTAATGCTGCATTGGTGAGT
ACATATAAAATTTTAGGACCTTCAAAAAACTTAGCCTGGTGAGAAATATTTGGTGACATA
CAATAACTACATTGGGTATGTACTGTGCTGTTTAAATGTGTAGGGGTACAAATACATTTG
CATGTGCTAAAAGGAATAAAATTCTTAAAAAAAATATATTCTAAAAACAATATACAATAT
GTAAGCATAAATAATAAACAAACAAAACTGAAATAAATTCAATTTGTTGTATGAAAAACA
TGATCTACATCTATATATAAAAATTGAAAATATTAAGTGGCAATCATAGCTATTGTTCTA
GTCTACACACTTTCGGTAATTGTGCTTGATTGTCACATTCATTTTATTTTATGGCTTCAC
TTCACTCTTAAAACCAAAATAGTATTGTAAGAAATTCTGGAGGGTGTTTCCACTATTTGT
TGTAAGTATTTGAAAATTATTATTGAACGAGGGAGTGAACCAGCTCAGTGTGCATTTGTC
GGTGTTATAGTATGTATTTTATATTCTATATTTTACCTATGGAGATATTTTTACATATTT
TCATAACTATTGTTGAAACAGTATGATTTGGGGTCTTTGAGTTTTGCAAGCATAAACATA
TGTGACACCATTCCTGACCCATACATTTTGTAATAAAAATGAACTTTTACTTTTCATGTG
GTTTTAATTTTTTCTTTTGCAGCGTATGGATTTAGGTGAGTGTCCCAAAATACATGATCT
GGCTCTACGGGCGGACTATGAAATAGCTTCCAAGACCAAAGATTATTTCTATGACATTGA
TGTAAGTATAAATAACTGAATTTTTTTTTGTTAAAATTGAAATATAAGACATTTACACAA
TTTAAAATTTTGATTAATGTATCTTAAAACTTCCAGTCTCAAATGTTTTGTTTTGACATG
AATTCGACCATGGATCAAAGCCGTAAGACTTATAATTATTGTATTTAAATTGCGGTCAAT
TAAATCAAATTTTACTATTTTATGTAAAGGCTACAGAGCACTTAGAGGCGTTTATAGCTG
ATTGTGATCGTCGAACTACTGCTGCTAAGCAACGTCTGGCGGAGACACAAGAAGAACTGT
CAGCAGAAGTGACGGAGAAAGCCAATGCTGTTCATGAATTGGCAGAGCAAATAGGGCAGA
AATTGGCTCGGGCTGAGGCACTCGGAGAAGAGGGTATGGTCGAGGAGAGTGTCAAATTAA
TGGGAGAGATCGACGAACTTCGCAAAAAGAAAGCTATCGCCGAGCAAGACTATCGTAATT
CCATGCCCGCTTCGTCCTACCAACAGCAGAAGTTACGAGTTTGCGAAGTTTGTTCAGCCT
ATCTTGGCATTCACGACAATGATAGACGTTTGGCCGATCATTTTGGAGGAAAATTGCATC
TCGGATTCATAACTATTCGTGAAAAATTAACAGAATTAAAGAAAACTGTGGACAAGCGAC
GCGAAGAGCGCGGCGCGTCGGAGCGCGAGCGGAGCAGCGGGCGGCGGCACTACGTGGGCG
GGCGGGAGCTCGACCCCCCCTTCTTGGCCGTCGGAGGTCT
(2440 bp)

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