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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14423_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		zinc_finger_homeobox_protein_3_isoform_X3_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001046 F core promoter sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007050 P regulation of cell cycle
GO:0007420 P brain development
GO:0007517 P muscle organ development
GO:0008270 F zinc ion binding
GO:0016604 C nuclear body
GO:0019899 F enzyme binding
GO:0032922 P circadian regulation of gene expression
GO:0043231 C intracellular membrane-bounded organelle
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045662 P negative regulation of myoblast differentiation
GO:0045663 P positive regulation of myoblast differentiation
GO:0045664 P regulation of neuron differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071559 P response to transforming growth factor beta
GO:1904059 P regulation of locomotor rhythm
Transcript
Level		FPKM:2.85 TPM:3.08
ORF EntryO_BomoOtmSK12750_complete:A_BomoOtmSK_comp14423_c0_seq1
Sequence
(Nucleotide)
GCATCGCACCTGGACTCCTCCGACCCCGGCCCCACCAGTCCCCACAGCCCCACAGAACTT
CAATTTCCATTCGTTTCTCGGGCCGCCTTCTTTAACGTGGTTTACGTGTTGCAGCCGCTG
TAAGTGCTTGTCAGTTTTGCAGTGCAACTGGAAATTCGCTTTCAAATTTGTCTTGTAAGT
GCAGAGCTTACAGACATAATGACCCGCAACTAGTGCTAGTATCTCTTGTTCTCGGATTTT
CGTACGATCTTGGGCTAAATGGTGTCCCAATGCTTCCAAGGAATCAGTTGAGAAACAATT
GCAAATACAACAATGAAAGGTCCTTTCCGGCTCCGGGTCTGCTGGTTCTGGTGGGGGTTC
CATGGCTTCAGGATTTAAGCCAACGTCGAGATGTGCGCCTAATTCTGGAGGAGACGGCCC
AGGACCTCCAGTCATCAGTTGGATCATTAGCGCTTGATTGTAAGCCATGTCAGCGAGGGC
AGCTTCTGGATTGGGAGGCGGCGCGTCCCCTCCATGAAAGTGTAATAGAGTCTCCAGCTG
TTGTTGGCTCTGCTGTCTATGATGTAAAGCTGATAATGTTTGCATATGTTTAACGTTTTG
CTGCAAAACCAACATATTATGCGTATGTTTTTCGGAAGTCATGTGTATTCTCAAGTTGCG
CGCCACATTAGTTTCATAGTTGCATACGTCGCAACGAAAGGTCGGTTTTGGTTTTTGGCC
AAGAGGTGAATGGTGTGGCAGAGGTGGTTTGTGCCCACCAGGAGGCGTGTGTTGCGGTGC
AGGTGGTAAAGCTCCCTCGCCTGGGTTACCGCCGTTTTGTAGTTCTTGCATATTATTTAG
ATGCTTATCCGATTGCATATGTATACTGAGATTACCTTTGGTAGTTGTAGAGTAATTGCA
CACTTCGCATCTGTAGGGTTTGTATCCGCACGTATAGGTTTCACCACGAGCAAGTCGCGG
GTGTGGTTGTCCGGCTATGCAGTAGATACAGCTAGTTTCGGCTTCGGGATGTTTCTCCTT
CATATGAATTTCTAAAGTCTCTTGGTATTTGTAATGCCAGTTGCATTTCGGACATTTTAA
TGTTTTGCAGGAATTCCGACTGTGCATTCCTGCTAATGGACCGCCTAAGCGTCCTGAATT
TAAAATTAATTCGCACTTCGGACAATCGGCTCCAGATGGACGCCCGCCTAGATGGTCCGG
ACAAACTCCTATCGTTGTCCCAGATAGGAAAGCCGGTGGAGTGGCTTGGAACGGTGGAGA
AGAATTCGGACTCGCTCGTGGTTGAACTGATGCGTTAATCGTATGAGGATGTGCTACAGA
GATCAAGGAATGTTGAGGAATCATTGTTGATTCAGCTATTGACCTTGGTGGTCTCCATGT
GTTTGGACTAGGCCTTCTATCATCACATGTGCCATTAGGTAGCATTGAATCATTTTCTCT
ATCTGGCGTCATTTGATCTGCTCGTTTGTCTATTGAAGGGTTTGAATATTCTGACATATT
TGCAGGACTACCTGAAGCAGAAATGCGAGATGGGGCTGCAGCTCCTACTGGTTCTAAAAA
TGAGACTAGTGGTTCTTTATCTTTCCCCACGCACTGAATAATTGCTGATGCATTTTCCCT
CGATAAAGCGTCCCTTTCAGAGTCTAGTAACGATAAACTGTGATCTGATTGGGCATGCGC
CACAAAAGACTTGGCGTAGCCGAAACTCAATTTACATATAAAGCACATTAATATTGGTTT
GACCGGTACGCTGACTGGACATTCAGTTAGCGGGGATGACGGTCTAGGAGTGTCTTTTCC
ACCTCTAAAACTAAACACTCGATAGCTGTGCATAACAGGCGCGTCAGGCCTGGCTCGTGC
TCTCTCAACGGCCAGTCTTCCATAGAGTGCACCGTATAACGATGGGTTTCTTGAAACATA
GAAAGCACTGGCTATTTGAGGAAATTCAAGCTGCTTTTCGACGACGTTGCTATCACGGCT
ATCGACAATGCACCCAGGTTCAATTTTTGATAATTCCGATAAGCTTGTTTCGCCCTCTGA
CATTTCGGGATCTTCGATGATATAGGCGGAACCGTCGGGGTTGTACACAATTTTGCCATC
AAATCGTTCGACGTCTGAGGAGAGGGGCGGGGAGTCACGGCGGGAGGTGAGGTCCACGGC
ATCGGGC
(2167 bp)

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