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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14406_c0_seq2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		cysteine_protease_ATG4B_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006501 P C-terminal protein lipidation
GO:0006508 P proteolysis
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006914 P autophagy
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0015031 P protein transport
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0044804 P autophagy of nucleus
GO:0051697 P protein delipidation
Transcript
Level		FPKM:4.00 TPM:4.31
ORF EntryO_BomoOtmSK12695_complete:A_BomoOtmSK_comp14406_c0_seq2
Sequence
(Nucleotide)
TCCCTTTAATACAAAAATATTCAGGTCTTTGGCAGTTATCTAAGTTATACAAAAATGTTA
TAGTACATTTGACTCATTTTCTCCATTATTTAAATATCTACATTTTTACACTGCCGAGTA
AAACTTTAGAAATAAAATAATGCGACACATAGATATGTAAAACAAACATTATAAGATGTA
ATTAAATAAAATGAACGGCAATTTCTTTTATCTACTAATTAACTAAAATTACAAATCATG
GGAGACACAATGCAGCAAAGCGACGTATGTAACAAATAAAAGAGAAGATCCGAGTTATAA
TAATATCAGATGCTTATTATTGACTAGACATACCTAAAAAAATAAAATAAACCATAATAT
AACTACGATTCCGAAATTTGGAATGTTATAATTTTATCTAAATTACAAGTCACTGTTGCG
TTTAAAGGCACTGCAAACTATCCAACAACAGCTTATGCACTCGGCACTAAGAAAATACGC
GTACTAGGATTTTATAATATACTCTAGTACTTACTTAAATATAGTGCTGTCGTCTTCGTA
AATATAAAATAACGTTACAAAGTTTACAATTATTCTATCAAAAATCCATCGTGCTAAATC
ACTCAACAGTTTTGGCATTCTCATTATGTTAATATTGAAATAACGACACACAGTGCGAAT
TAAAATTGCAATGAACAAATTAATAGTTTAAAAAACCGTATCAATAACAAACGTAAGAGT
GCCTGAATAAACTATAATAAATACCATGTCTCGATATTGCATAACAATTACAGGGTAATT
AGTTGCAAACTTTTTGCATTTACCCTGATATATCATACGGGGAGGTTATAGGAGTAGACT
CTTCATAATCTCCAAAAAAAAATGTTTTATACTCGATTTAGGAATTACCGGGTTAAACCA
AAAATTTCTCTAAATTTGGTGTGAGTTGTAAACTCTAAAGATAAAACTAATAAGAATTTC
TATTAGTTGTCAACAAATAAATTATATTAAATTTTAAATTATATAGCATTTCAAATATTG
TATCTACCCGTTCCAGGACAATATAATTTAACAATGCAAGTTTCATATTTTAAATGACCC
TTGTTTATAGAATTGTATCTCTTTCCTTACCGACGAACAGGACAAGACCTCGGTCTAACA
ATTATAAGCTCAAGGTGACGTCGTGTCCTTCTGAATAGGAACAAAACAGCAGCCATATTA
TGTAACTCTTAATACAGATTTATGCAGAAGTAAATAATAATAATTATTAATAATAAATAA
TACAAATATATAAAAAAAACCACCTCTGGTTTAGGAGTTACACGAAACCAGATGTTATGT
GAGTTAATTAAAATCAGAAGACTCAAATGATGATTTGGTACTATACATAATCAGCCGACA
ATTAATTCCAAAAAGATTATTCAATGAAAGAGCCTACCACGTTTATCAGAAAAATAATCT
GCTTATAGTTCGTTGAATTGTTACTTTAGTGATTACAAAAAAAAAGCGAACCTCTGACAG
GGTTCGTAAAAATGTCTTTAGTAAATACTCTTTCGTAATGTTCAAATTACACAATAAGGC
CACATTATCTGCGTTTTTCAAAGAATTTCGAATTCTTCATCGGAGTCGTCAAACTGTCTG
TCCACATCTTCAAACTCCGTAAAGAGTGAAGTGCTTTGAAAGTCAATGTCGGTTGTGTTC
GGTCCCCAATGCGACGGTCGTTTCTCGCATATTTCGAACAATGGTTGGCTTTCTTTCATA
AACTCCTGTTCTATAGTTTCACACAGCTCATAAAAATCACCTCTAGTACGACAAAGGAAA
CACACCGCCACTGAAGGATCCATGGAGAGGATAGGTATTCGAGATGCATATTTACAATGA
TATGTACAGTCCATTTCCTTTTGATCGTCAGTAATCTTACTCTCAACTAATCCAGACCGT
TGAGTTGTATGGGGATCTAAATAAATAACTTCATCTTCAACACAACCAATCAGGTACAGA
GCTTGATTTGGTTTGCCTCCTATGACTCCAATCGATTGCGGACATTGAAAGCACATCTTT
AATCCATTTACGTAGACAGGATTAATTTCGCTAAGTCCGAGCCGCAGTGGAACTATTAAC
AATAGAGGCATCCAGTCTGACACCACACCGTCAGGCGCTGAAGAAGTGTCACCTCTATCA
TTGTTAACTAAACATTGTTGCAAGATATCTTCCTTGACAACAGTATTATCTAAAGCAACA
TGAATTGCTAATGAACTCCACTTGTCATACACAGTCAGTTTTTTTAAAACTTGAGCTATT
GTATTAGGTCCAAACCACTGGCCAACTTCTTTTCCTTCAGAGGCACCCATCAATGCCACT
TGATGGATAGAATAAGGTGCTTGTTTCCTTTCTTCAAACCTTTGTATGATCTTTAAATAA
GTTGGATCCCTTGTTTCTGGTGACCATACCCAGTCAACAGATAAGTGTACTCTGACAAGA
GCAACACCTAATACCATCTGTCCACATCGTAACATACAGCCCCATCCTTTATCAGAAGTC
AAACCTTCATCACCAATTGGTACAAAGCCTTTTCTGTACGTACACCATATTATTGATGTG
ATATCTCTTCTAATACGATCCAAATCTTGTATAGCACTGTATTTTTTCCCCAGTACCCAG
ATACTTTCCTTTGTTTTAGGAATATCGTTAGGTTCAACATTATTACCATCCGCTCCCGAT
AGATAACACATATCAAATACAGCATCCATTTTAAATCATAGTTTTTTTACGAAAAGATTT
ATTGTTTCATCTACAACGTCAATGTATAGTATTTACTACTTTTAGAATAAAATAAACAAC
ACGAAAACAACAACGTGACTTCATTT
(2846 bp)

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