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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14405_c0_seq1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		interference_hedgehog_isoform_X1_[Bombyx_mori]
Ontology
GO:0007224 P smoothened signaling pathway
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042803 F protein homodimerization activity
GO:0097108 F hedgehog family protein binding
Transcript
Level		FPKM:10.11 TPM:10.90
ORF EntryO_BomoOtmSK12693_5prime_partial:A_BomoOtmSK_comp14405_c0_seq1
Sequence
(Nucleotide)
TTTAGCTTGTGCTTTCGGTCGTCTGTGTTGTTCTCCTCACTGTTTTACAGTCAGTGATGT
AAACAACTTATCATTTCACGTGTTTATGATCATATTTATAACTGAATTGTGTGTGAGAAA
TGTGCTAGTTTTGTATGTGGCGGCTAAGAGCACAGTTTCGGTAACATTTATGAGTGAAAC
GGTACCCCACGATGTCTTTGCCGATAAGCATCCCGTTGCTGTTGGCGGCGACCGCGGTTG
TGGCCGAAATCGACATGAACTTCATAAAGTATCCAGAATCCGTAACGGCTCCTGTCGGTG
ACTCGGTAACCTTCGAGTGTGAAGTGGACGTACCGGCTGAGAAGCTGATTTGGCGAACGC
GACCCGTTGACGGCCCTGAAGGTATCTGGGAGAAAGTGGTGACAGGAAAGGAAAAATCCA
CTGAAGTCTCAAGTCGTCTGGCCGTCGAAGTGAAAGACGATACACAAACTGCTTTTTATC
AGTGCGTAGTATTGTACGGTTCAGTGATATTGGTATCGGTACCAGCAAAGCTGAGTGTAG
CGAGCCTGGATTTAAGCAGGAACAGTCTTGAGAAACGCGTCATTACTGCACCATTGCATA
ATACTGTGGTTCTTCACTGCAAGCAACCCCTGTCCGATCCACCCGCTGACCTGACCTGGT
GGAAAGAGAGTACAAAAGGTTCTAAGAAGCCAATAGAAACTCCTCACGGTGTACTGGTGA
TCCACAATACGTCGTTATCTGACAGCGGTACCTATGGCTGCAAGGCCACGAACAAACTCA
GCTTGAAAGCTGCGGATCTACCTGAGAAGACTGTGCTGAAGATACAGCGTGACGATACCG
GAGAAGTCAGATTCGTGGAGTCGGAAGATTATGTAGGGGTCAAAGATAATGACGTGCTAA
CGATGCCAGTAAAGCCGAGAGGAACCCTAAGGTTGTATTGCGGAGTGGTCGGAGTTCCTC
CTCCGAAGATCACTTGGACCAGGGAAGGAAGAACGCCGCTGCCAAAAAGACACGATCATG
CGATACTTACTATTGCGAACTTTACCGCTGCCGATGAAGGTATTTATTCGTGTTCAGCAA
ACGGCATACGTAGGTCTTGGAAGGTGGTGGTGTTGCAGCCGCCCCGGTGGGAGGGCGTCG
CTGCCAACGCCAATGACACGGAGGGCAAGGGGGTCAGTATTAGCTGCGGCAACGCCGTCG
GGTACCCCCAGCCCGAGGTCTACTGGGTGTTGAACGGAGAACGCGTCAGCACCGGTACCG
GAGTCACCGCTACAGATTCAGACCTGAATATCGAGCACCTAGAGAAGAAGCACGCCGGGA
TAGTTCAGTGCTTCGCGTGCAACAAGCTCGGGTGTTCGTTCCTGGCGGCCATGCTCACTG
TCGTTCCGCTGCAGATATCGGACCAGGATTATTCAATGGAAACGCCGAAAACTTTGCAAT
CATCATCGCAACTTCCTAAACGTCATAACAGGAAGAATTCAAGGAAGCAGAAAGTTGTAC
CAGTGATGGTGCCACCATCGCGTCCTAACGTGACCCGCCTGTCCGACCAGAGTGTGATGC
TGTCCTGGACACAGCCACGAGAAGGACTTCCCATATTGTTTTTTAAGGTGCAGTACAAAG
AAGCGACGAATACGAGCAAAGAGTGGAATACATTGACGCAAGAAATCCCTCCACACATAC
ATTCTTATGAAGTCGACGGTCTCACACCGGACAAGTACTATAGATTTCGAATAGCAGCGG
TGTACTCGAACCAAGACAACAATCAGGGTCGGAGCAGTACACGCTTCTTCCTGCAGAGCG
GCGAGTACAAAGGGCCCAGTGCACCTGTACTCACCAAAGTTGAAGCCACCTCGCCTCACA
GCCTACAGTCAGATTGGACGTGGTCTCGTGGTGATGGTGCCGAGACAGAAGGGTTCTATC
TCTGTGTGCGTGCGGTGTCCTCTGCGGGAGCTTACGAGTGCGTGAGAGCTCCTGCATCAG
CTCGTTCGTTAGAGCTGCACCACTTCTCACCCGATACTCAATATGAGTTGAAGCTCAGGG
CGTACACATTACAGGCCCCTTCTGAATTCAGCGCTATCAAGGTGGCAAAGACCCAGAAGC
TATCCAACGCGCCGACATCGACGAGTCCAGCGCCGGTGTCGGAGGCGGGCGCGACGGGTG
CG
(2162 bp)

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