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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14369_c0_seq3
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		P-element_somatic_inhibitor_isoform_X1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0010628 P positive regulation of gene expression
GO:0044822 F RNA binding
Transcript
Level		FPKM:27.25 TPM:29.37
ORF EntryO_BomoOtmSK12578_complete:A_BomoOtmSK_comp14369_c0_seq3
Sequence
(Nucleotide)
GTTCGCGTCGTTCTTTGGGCTCGCAAGATTGCGAGTAAATTTATTTCAATTTATAGTTTT
AGGTCTTTTTGACCTTTTTTTTTTCATGGCTGCGTAAAAACGCGGTTGAAAGTGCAGATT
GTTCCAAACATGAGTGATTATTCTTCTATGGCTACGCTCCAAAATAATAGTCAAACGGCG
GGATACGCGACTGCTGTACAACGTGCGAGACAGGTAGCTGCTAAGATTGGTGGTGGTAGC
AAGAGGCCATTGGAAGACGGACCAGAACCAACACCAAAGAAATTAGCACCAGTTGAGCCG
GTTTATACACCACAACCTCCAGTTATGAATTTTGTTGACAGTGTATCGCCAGTTGCGGTT
GGTGGTGGCGGACGTATGATAGCAGGTGCGGGCCCTGGCAGTGGACCAACAAATTTATTG
CCCGATCAGAGCATCAATGAATACATCAGAGTACCTGATCGTATGGTTGGACTAATAATT
GGACGTGGTGGAGAACAAATCACCAGACTGCAAGCAGAATCCGGTTGCAAGATACAAATG
GCACCACCCACTGATGGAAATCCTGATAGGCTATGCACGCTTACTGGTTCTAGAGATGCT
ATACAGAGAGCTAAAGAATTAGTGAACCAAATTGTGAATCATCGAGGAAGGGAGAACGCT
CCACAACATCAAGACCCTTCAGAACCTGGAATGAACATGAGCAGGCCAGGCCCTAATGCA
ATGGAAGAGATCATGATCCCCGGCGCTAAAGTTGGCCTGATCATTGGCAAGAATGGCAAA
ACAATAAAACAACTCCAAGAACAAACTGGAGCCAAGATGGTCGTAATACAGGATGGACCT
AATGAAAATTCATTTAAACCACAGGAGAAGCCTTTGCGTATATCCGGCGATCCGGCCAAG
GTTGAGCACGCGAAGCAGCTCGTGTTCGAGCTCCTCGCCAACAAGGACATGCAGGAGCCG
CCGCGCCCCTACGACGACGGCTACGGCGGCTCCGACCCCGGGAACGGACTCGCCACCACT
TCCGCTGAGGTTTTAGTCCCAAAAGTGGCTATTGGTGTTGTAATCGGCCATAAGGGTAAA
ATGATAAAGAAGATACAAGCGGACACCGGATGTAGGGTCCAGTTCAATCAAGAGCATGAT
GAGGAACCAGGGGATAAACTATGCTACTTGCAGGGGAAACCCCATCAGCTAGATCAAGCT
CGTCAGATGATCGAAGATCTTATATCTAGTGTCAAAAGATGTGAGGAGGACAGTCGGAGC
CGTGCAGTACGCGGTCAGGGCCAGCAGAACGGCGACAGGGGCGGCATGGAGTACGGACAG
CAGTGGCCCGACCGACCAGAGATGCGCGTCACCTTCACCATCCACGGACCCAAGTGCGGC
CTGGTCATTGGCAGAGGTGGTGAAATCATAAAGCAAATAAACGCTCAGTCCGGAGCCCAC
TGCGAACTAGACAGGAGATGCCAGAGTAATGATAGAAATACAAGGACGTTTATAATCAGA
GGACACCCAGAAGCAGTTGAGACTTGTAAACGAATCATTATGGAGAAAGTTGGTGGGCCT
GTCAACTTTATCCCGGAAGGCAACGGTAACGGCAACGGCAACGGTAACGGGTCCGGCAGC
GGCGGCGGCACCCCCGGCCCCGAGTACTACACGGGCGGCACCCCCGCCGCCTGGGGGTAC
AACCCGCACTGGCACCAGCCGGCCGCCTCACAGGGACCGCAGCAACAAGTATCAATAAAC
CCAGCGACGGGTCAACTGGATTATTCACAACAATGGATCGACTACTACCGCTCTGTGGGC
CTTGTCCGGGAGGCCGAAGCCATCGAACAGGCTAAAATGCAGCAGCAGCAGCAGCAACAA
CAACAACAGCAGCAGCAACAACAGCAACAACAACAACAACAGCATCAGCAACAAGAAGAA
GCGAGTAATCAGTCGTTGGGCGGTAACGACAGCGGCGGTCCTTCCACCCCGCAGCCCACG
CAGGACTACAGCGTGCAGTGGGCGGAGTACTACCGCAGCATCGGGAAGGTCAAGGAGGCT
GAGGCCATAGAGGCACAGATCAAAATTAAGCAGCAGCAAAACCAACAGCCGCAGCAGATG
TCGCAGGCGGAGCTCCCGGGCGAGGAGTCCACGCCGCCCGGGCCCGCGGCGCAGTACGCG
CAGTACTCCATGTACCAGGGCGCCATGTACCCCGGCTACTCCGCCTACGGGTACCCGGCC
GGCTCCGACCACCAGCAGTGAACTCAAAATGAACGGGTCGAGCGCGGGCTGTCACGACGC
GACACGTCTTGTAGATTTAATAATTAAAAAAAAAATTATAAATAAGTAAAAACGTTTCTA
CATTTCTTCACAGTGCGAGCTATAGATGAGACATCCACAATAAATAAATAAATTAATTAA
CAATTTAAAAGAAAATACGTCTCTGTACGCGTAAAAACAATGCTAAGAGAAAATAATTAA
CGAACAACGTTTCATAGTTTTAGTAATAAATTCAATTAACATAAGTAACGAATTGTTGAT
TCACAATTTAATCTGACCTCGTAAGTTCTCGTAAGACCTCTAGTTTCTCACAAATTCACT
TGTTTGAGACAGCATTTTATTTCTTGTGGATCCTACTTCATTTACTTTATCAATACACTG
TTTAAAGTATATAATCTTTATGACTGACAATTATCAAATTTATATTTCAAACGTGGCTGT
GTGGTCTATTATTATATATGTTTTTTTTTTACTCTTTATAACAACAACTGTACTACTTTT
GTATTGTTTAAAAAAAAATGTGTGTAAACTTTTTTTGATTTTCCGTGCCAATATTCATGT
ATGTTGTGCCAGTCTGTCCAGGTTTAAAATATAGCCACACTGCCTTTAAAAGTCAAAAAA
TGCAACGGCGTACCACCCGGGCTTGAGAGAGAGAGAGAGACACTGAATGAAAGCGTAATG
AGAGCGAGACATACTTCGCCGAGGAGCCGAGGTAAATGTATTGAGTGACTTAGCACATTA
CACGATTGTCGTTAGGACGCGTTAACGTTTTAGTGGATTTACGCCACTCTGAATGTTTTT
TATATTTATCGAAACTATGATATCAGTGCGAGGGAGGAAACTCTCGGAATGTGCGTAACG
AACTCGTATCTAGTTTTTAAGTTAGCGACTAGTTTTATAAAGTTTACGCGACATCTCTCT
TGACTCAGCTCCTTTAGGTAGTAATCGACCGCAGTTTTTAAAAACACAATATGTATTTGA
AAATTTAAATCTTGTTACAAATAAAATTATAATGTAATTTTTTTAGTGTATAGACAAACA
AGAGGTAATGTAAATCGATCTACATTCCTATAAAAAAAAATTGTTCAATTATGGGTAAAT
AAAAGAAAACTTATCTTCGCAAGTTTCCGCTCGAGGTTTGAAGGGCGTCGATCCCGAGTC
TTGTATTATTTTTTAAGATATAAAGTGTATGTTGATTGACTTGTGTGTTCATTTATTTTA
ACGTATTTTTCTCTCCGCAGTCCCGCAGGTAAGTGACCCTAAAACCGAAGGTCTGATTTA
TGCCATGATGTGTTTTGTTAAATGTTTAATGTTTGTAACGATAGCCTATAAGTAGCACCA
TTTTACGTGATAGTAGCGTCTTCCGATGATGTAAAAAATGCCTATGTCGTTTTTTTCCGT
GTTTCCTGTGTGCCCTCCACAGCATAATGAAGAGGCAACACGGGACCCCCGACCGAACTT
GCACCGG
(3727 bp)

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