SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14357_c0_seq4
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		hemicentin-2-like_isoform_X2_[Helicoverpa_armigera]
Ontology
GO:0005576 C extracellular region
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007158 P neuron cell-cell adhesion
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007413 P axonal fasciculation
GO:0007420 P brain development
GO:0016020 C membrane
GO:0030424 C axon
GO:0031175 P neuron projection development
GO:0031225 C anchored component of membrane
GO:0045665 P negative regulation of neuron differentiation
GO:0048167 P regulation of synaptic plasticity
Transcript
Level		FPKM:6.07 TPM:6.54
ORF EntryO_BomoOtmSK12550_5prime_partial:A_BomoOtmSK_comp14357_c0_seq4
Sequence
(Nucleotide)
GGGCTCCAGTAACTACTTAACACCGGATGGGCAGTAAGTTTGTTAACCCATCTAAGCAAG
AAAAAGAAAACGTTACTGTGGTCTGGCAATACAGAAACTTCAAACGACACTGAGTATTTT
TACTAGTGTGTGTGAGCCGTCATGGCTGATGCTAAACGCATTACATCACGACCACCGGTC
TGAGGCCGCGGCGCCAAACGTCTAGAGATTCGGCCAATCATTCAACCTCAGTTAGACTGC
TATGAAACTAGTTTCTGCGGTTTATATCTAACTAGTGAAACCGGCTGGGACTGCGCTGGG
ACTGTGTCGGGACTGCGTCGGGACTGCGGTGGGACTGCAAGTGGTACACACCTATCTGTT
CAATGTACTAGTGCTATAGCTACCGTAAGCTGATGGTATTGTAATTAGACCATTTCCTCT
AATGCTGATTCGAAGATGTTAAACAAATTGGATAAACACAAATACATATAGTGATATTTC
CCATTTCGTGCATACATATGGCGATAGGCTAGAACCGATTTGACGTTTTAAAATCTGATG
TTTCAATGACATTGTCATGTCAATATTGGAGTCACCGAACAGGTTCTAATCAAGTATTCG
TAGCGGAGAGCTCCAAAAAAACCTTCGACTGCGTAGCGTTACACATCGACACCGGTACCA
ACCTAGGTGGTGTCCCGCAGGTCTAGTGAATTAAGCAATAGATTTTCCTTACACTGCTGT
ATTCTAATAATTGCGTGTTTGTTCGTGTGATTGTGCACTAAGGTTCCCCGGACAAAGACT
TCACAACTACAGAACTGTAAAGTTGTGATTTACTAAATTATAATCATTTTGTTTATTTTA
TAGATTCTGGCCGATATTTTTTTCTATTGCATTTATCGGCCAGATTGAATGAAATAAACG
ATGAATTGAAGCTTTAATAATTATGTATGTACTCCGCGAAATCGGGTCCTCCGCGGTCCC
TCCGTGACCAGTTACAAAACATATAAAGAAACATGTGATTGCGCCTAAAATGTGTTGAAT
CAGCATCGCATAATGATAAGAAATTTAAATAAAATGTTTTTATCACGTAAAAAAAATCTT
TAACGTCACTTTGTCTTAAAGTCATCTGTGATTTCCGCTTAACTATAGTCCATTTACAAA
TTTTATTTACATCTTTTTTTTATATTTAATGTTTTACCGCCATTATTAATCTAAGGCAAA
CTGTACACGCGCGGGGTTTATAATAATTTCAGTTACAAATCGCTCCGAGCTTTCCGATAG
TGCTTAGTTGGCAAAAAGTTTGTCGTTTCTTTGGACGTCACTAAGCTCCGCAAGTTCACA
GTTACCGTGGTCAGTACGGCCATTGAATATACTGGTTTGGTACCATCACCACTGCGTATT
CAGACGTGATATCCTCGGTCTGGTAATCGTTGTCCTGTGCCTTCCTGGGACCGTGCTTCA
GCAGAAATACGTGAGAAAGCCAGCAGACACCAGTTCCTTATCCGGTCATTAGGGCTAACA
GTTAAGTTACCACAATGAACAGAAGTTAAGTGAAGCACGTTGATTAGTATTTTTAATAGT
ATATTGATTGTGTACACTAAATAGTTCATAGCGTTTTAGATACAAGGATCCGACATATCG
TTTCGCTCGTAAACTGTAAATGGTAGAAGATATTTGCACCACAGATAGCTTCGATGTTGG
AAGATCCCGGATGTCTGGCAGACCAAACTTCTGTCGCGAAATTTCAGTGTGAATGTTAGA
TCATTTTATTAGTTTTGAGAAATCCAGCTCTAGTCTCAAGGTGGTAGCGTTCACTTTTGG
AATTAGTATCAGCAGGGTCGCACTTGCCACTCGCCTCACGCGATAGAGAAGCTTACTTCC
GAGTGTGAGTAGTAAGTCCAGCATTAGATGAGCCCCCAGGCCGACCAGTCGGATAGCACT
GGTGGGGCTGGGGGCTCTGGTCGAGGGCAAATCCCTGGACCGCGGAAGTTAGTGTTTGCC
GACTACAGCATGTCGCTCTCCGGGTTCTCTTTCTCGTAGATCTCTTGAAGTTGTTGTTGT
TCTTTCACCTTCTTCATCTGGGCGTAGATCGAGGCCGCTTTGTAGTTGATGGGCCCGTAG
TCCTTGAGGTCGGCGTCGGCGTAGATGAACTGGTCCTCGGGCCGGTAAGGCTTGTTCGGA
GGTTGCTGGAGACCGTGGAACGGCAGGTTCTCGTAGAGACCCGGGTGCTCCGCCCCAAGG
TTGCCGTTCGCGGCATTATCTACGCCATTCGTAGGAGGGCATTTGGATTTGGCGCGCATC
CTCCGGCATATGCATATTATGATGATGCACAGGATAACGGTCAGGACGAGCGCGGCCAGC
GCTATGCCGCCGATCATCAGGAGCTTTTGTTGGTCGCGCCACCAAACTTTCGAAGCCATG
ACATCTCGCTCGCAGGGCCTGGAGACGCCCACGCTGTTGTTCGCAAAGCACAAGTAGGTC
CTGTAGACGTCCACGCCAGGACTGAGCCGCAGATAGCTCTGGGTCCCGGCCTGCCATATC
TTCTCATCCGTTAGGCTGTCGTTATCATTCTTCAGTTTCCACATGAAGGAAACTTCTGCT
GGGTTGGCCTTGGCGCTGCAGACCAGCACCTGTTCGCCGTCGATGTTGGTCTGCTGTATG
CCGCATTCAGGAATATACAGCACGTCTAGCAGCACGGCGGTGCTGACGGCACCGTGCCGG
TTGTAGGCCTCACACACGTAGCGGCCGGCGTCGCGGCGCTGCACGGCGCCCAGCAGCAGC
GTACCGGAGGCCGACAGCGGCGGGCGCTGCGCCTTTGCGCGACTACGAGGCGCGGCCCCG
CGCCTCCACCCGTACGACCGCGGCGGGAAACCCCTGGCGGAGCAG
(2865 bp)

- SilkBase 1999-2023 -