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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14296_c0_seq3
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		R2D2_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0008298 P intracellular mRNA localization
GO:0010494 C cytoplasmic stress granule
GO:0016020 C membrane
GO:0030425 C dendrite
GO:0030529 C ribonucleoprotein complex
GO:0036464 C cytoplasmic ribonucleoprotein granule
GO:0044297 C cell body
GO:0044822 F RNA binding
GO:0045070 P positive regulation of viral genome replication
GO:0046726 P positive regulation by virus of viral protein levels in host cell
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.62 TPM:0.66
ORF EntryO_BomoOtmSK12346_5prime_partial:A_BomoOtmSK_comp14296_c0_seq3
Sequence
(Nucleotide)
CAAATAATTTAATTTCTGAATGTCGTGATATTCCCACAGTCAGGGCCCCAACACCAGGCC
ACATTTGAGTTCCGCTGTAAGGCTTTAGGTGAGTCTGTCTCTGCTTCTGCACGATCAAAG
AGGGAAGCAAAGCAGGAAGCAGCCCGTGCCATGCTGTTGTGTCTTTCTACAATAGGTCAC
CGTGTACCCCCACCATTTGCTACTGAATTTACACAACCCTCTCATAGTAACCAATCGGCT
GGCGAGTGCTCCGAGGGCAAAGCGCCCACAGTGGACAGTCGCAGCTATGTGGCGCTGCTG
AAGGAGCTGTGCGAGGAGTACAAGCTGCCGGGCGTGGAGTACGCGCTGGTGGCGGACACG
GGGCCCGCGCACATGCGCCTGTTCAGCGTGCGCGCCAGCATCGGCCTGCACTCGCGCGAC
GCCAGCGGCACCACCAAGCGACAGGCGCGACAAAAAGCCGCAGCCGACCTCTACTTGTTC
CTGCGTGAAAACCTCTCGCGTCTCACTCATGATTTCGTTGAGGAACAAGCGCTGGTGCGA
GCCCACGAGCGCGCCATGGAGCGGTTGGTGGAGACCACTCCCGCGCCCTGGAAGCCGGAC
CTCGGCCAGCGCGTCTCCGAGTACCATTACGGCCTCATCTCGCACACGGATCCCGAAAAA
CGCATGGCGGCTCGAGCCGTGCTATCCGAGACGGACGACATAGAGGAGGCGGCTGAGCGC
GCGGCCGCGGCGCTGGAGCTGCAGACGTGCTGGGAGACCCTCGACCCGCTCCACGTGCTG
AAGCTAGATGCGGCCCCGGCTCTAGCCTTCAGCGGACACTCGCGCGCGGACGCGGCCCGG
GCGGCTCTGCGGTACCTGCGCCGAGCCCTGCGCGACGTCTCCCCTCCGCCGCCCGCCGCT
CTGTGACCGCGCTGTGACCGCACTGTGACCGCGCTGTGACCGCACTGTGACCGCGCTGTG
ACCGCACTGTGACCGCGCTGTGACCGCACTGTGACCGCGCTGTGACCGCACTGTGACCGC
GCTGTGACCGCA
(1032 bp)

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