SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14293_c0_seq4
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		sorting_nexin-13_isoform_X3_[Bombyx_mori]
Ontology
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008289 F lipid binding
GO:0009968 P negative regulation of signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
GO:0043547 P positive regulation of GTPase activity
Transcript
Level		FPKM:0.94 TPM:1.02
ORF EntryO_BomoOtmSK12340_complete:A_BomoOtmSK_comp14293_c0_seq4
Sequence
(Nucleotide)
TAACACAAGTTCTTTACGAACTTACCACGGGACCAGTTAACTTGGCGTGGTTGTTAGTAA
ATATTTATTATTTATTTATTTATGAATTGACTAAAAAAGTAACTATGCATTACGTAGTAA
AATAATATTGTTGTCCCTTCACCTTAAGTTTTTCATTTAATCGCGTTTCGATTTCGGGAA
TGACGTTTTCACACCCTATATATTCTATCTGACTATATTTGCATAAAGGGTGTCCTTTCT
TATTTAGAATAATTGTTTTTTTAACTTTTCTTTTCAATTCAACAGTTAAATAGTCCAAAT
CTGAATGGTATCAGAACACAACTTGAGTATTTTTCATATAACAGAATTCTTCTTCGGCGC
TGATACTCTAGGAGAATTCGTGTAAAGTTTCTTGAACAGACCTTGTATGTTGTTGTCGGG
AAAGAGATTGGTTAGGGTTACTTCCAACAAAACGAATATTAAGCGTCTGTTGATTTCTTG
TATTTGGAATAAATCGAATACTGTGAGGAGACCTCTTCGAGCTGAATCAGTACCGACTAT
ATGTTTGAGATCATCAGAGCAGGCCGAGAGCAATGCAACTTTAGCGGCAACCCTAGTTCT
CGCTTTAGTCGCCGCATCCCTTTCGCTGTAACTGGCACTGTGTCGGCTAGTTAACCATTG
CTTGAACGTTTTCAAATACTGAACCACGTTGCGAGGTGACGTCAACGACGATACCAGTTC
TAAAACTTTCCTGTTCACGCGATCCGCAATGAGGGTTCTGAGTGGTGCAAGTAGTCGACG
TCTGAGCCACAACCCTCGGATGCCAAGCACTTCTTCCAAGAGCTTCAGCGCCATGCTTTC
ATCGCCGTCGTCTTGTCCGTCGGTCGCGTTGCCGGTTTTAATGCCGTCATAGTAATTTTC
AGTGTTCTTTCCTTGGAAGACCTTTGAGATTCCGTCCATAACTCCGTCGACAGTGTTCAC
GAACTGATCCGGCATATTTTTCAATGTCCTCATTCCGGCTCTCAGGGGGTTCACGAGAAG
CGCATCGATCGTATTACTATGTTTTTCGGTTTGATTGACCGGACTGAGGAATCCCCCCAA
GTAGTCCCGCGACAGCAGCGCCATGTACTTTGCCTCCCTCGAAAGGCTGGCCAGAGTCTG
AAGGTAGCCGTTCAGTATCCGTTTCCTGTTCTCCAAAACTACTCGTGACGTATTCTGAAA
CGTTTTTTTAGCCGGAAATGGAACGTTCCCAAGTTCTGGCCATTTTTCTTTAATAGAGCA
ATGCAGGTCATAGAAATCACTGTATCTCCTATATATGTGCCACACCTCGTTGTCTGAAAG
TCTCGTAACGGCTATGGCGTATATACCAAAGGCTCGACCTTTGTCTTGTACTAGTGCTGT
TTCTATGATACAAGCCGATAGCGGTGACAGTAAATTTTTGGCTTTCCTACTGATTTCCGT
GTGCGACATCGACAAGCTGGAGTTAGCTGTCAAACTTGAGGGTCCTGTAATGACACATAA
AGTACATTACAAACACACTATAACCTCATTCAAAATCCATGGTAATATCAATAAAAGCAC
TTGCGAATAGCTCCATACGGCACATTACGAAGAAGAACTGAAACATAACTGAATCTCGCT
TTTTCACACCGAAAACAACGACTCACGCGCCGTTTATCGCAAACGCATGGTATCATGTCG
A
(1681 bp)

- SilkBase 1999-2023 -