SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14293_c0_seq3
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		sorting_nexin-13_isoform_X2_[Bombyx_mori]
Ontology
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008289 F lipid binding
GO:0009968 P negative regulation of signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
GO:0043547 P positive regulation of GTPase activity
Transcript
Level		FPKM:0.62 TPM:0.67
ORF EntryO_BomoOtmSK12339_complete:A_BomoOtmSK_comp14293_c0_seq3
Sequence
(Nucleotide)
ATTCCACTGCATAAGGCTACTACTTTATAACCATGCTATTCCTAAAGGGTTCATATTGAC
CTGCACCCTCATTGTTCATCCTTTCAGCCAAATTTCCAACTATATCAGACCTTGAACGGT
TATGTCTTGTACCGGGAACGTGTAATAAGTCACCGCTGTACTTTTTAGTGTCCGATTTTG
GATCGGTTTTCAGGTCACTATTACTTCTGTAAGTACCATCCTCAGTTTCCATCATAAAAT
CCGCTTGCCAAGAAGGATCGTCCTCTAAAGCATCGCAGACGCATTTCTGCAGCTCGTCAA
AACACACAACTGGATTGTTCGTAAATTCCTCTCCTTCAGTTGTGATTTTACGGACGAGTT
CCGAATAACAGTTCTCCGGCACGCCCATTACCGGCGGTTTGTTGGGCGATAAAAACAGAT
CGCACAACTCGAGTGCGGACGAACGTAAGTTGTCTATGACCTCTTTCGATGTGTGCGGAG
CGTCTGACTCATGGAGCTCTATCTCTAGTAAATATTGCGCGTTAGACTTCCACGCTGCTG
TTGCTCTCAAAAACTTCAATGTTCTCGCAATTTCCTCGGACATTTTTTGTGTATTCAAAT
TATTCAGAGTACCTTCTTGAGGACCTAACGTAGCCCTTCTGGCCTGTATTATCCTGGTCA
CGTACTGTAACGAGGATAATTTCTGACGATCCTGAAGCTCCCATTCGCCGGCGCTGTCTT
TAGAATGTAGTTTCTGTATATCCTTTTCTACTAATTCTAAAGTTGCGTCCAACTCTTCAG
CATCCCCGCAGCTTCTTATGACTATCAAAAACAGTTCTGATGGAAGTATTGAATCTTTGC
AACAAGATTTTATGATCATTCTGTTGATATTATCAGGGTCACTCATTAAGCTGATTATGG
GGCGTAAAACAACGGCTGATAAAAGATCAATCAAAATCGTCTTCATTGCATGACATCCCC
ATGCTTCTTCTGGAGCTACCAAATACAATATAGCTTCAGATACCTCACAAAGGAGCTCAT
ATTCTTTATCTGTATCATCACAGAACACATCTCTACACATTTGTTTATTTTCTATAGCAC
ATTCAAGTTCAAAAAATATATCTTTTAATGTTTTCCCTGTAATATTTTCAGAGCTATCAT
AAAATTTTGATTTACCAAATATTTGAGAGTCTGGCAACCAAGATAAATCTGTTTCACTCT
TGTTCCTTCTGTGTGTTTTCTTCTCATCCCTTTTTGGACTTAGTTTAGCAGTATCATTTG
CTGATTCTTTGGCATTCATTAACTCTACATGTTTCAGGCGAACTCTTGATTGCTTAAACA
TCTTCAAATGAGTTGTTAGTTCTTCAGGAAATCTTGTTGAGAGCAAATTAATCCAATCCA
CACATTTTATCCTATTAACTACATTAGCACCAGTAGCAAGCACCAAACGTTTTATTGCAT
GCTTAGTGAACTCATCATCATTTGTCAAAATCTCATACCATGGTGTAACATAATCATTTA
TAATTATTACAATTATTTCATTTAGAAATGAATCTACAGTTTCACTTCCTGTTATTCTAC
TATCAAATTTTAATAAAGGTACCTCTTTTTGAAACTCTTCTAGAACCTTAGGAAGAGTAA
TAGAGAAATTATTACATTGTAATGGATCATCAGGACTGTCTATATCAACAGAAAATATTT
TTTTATCATAAACGCAATACAGGAATGTCAATACACCGAGTATGAAAGAAACAATAAACA
ACAGTAAAGAAAAATAGATTCCAATTCCAAATAAACCGGTGATTATTACGCTAATCAAAC
CAAACCATCCTGCAATCTTTGCTATCATATTATCGAATATAGCGTTTTGTTTTGATCTAA
TTTACAAATGCCTATTAAACGCTCAAAATTCACGTAAGAGACGAAAATTATTACAAACTT
TATCCACATATTTCTAATTTGCAAAAGAG
(1949 bp)

- SilkBase 1999-2023 -