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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14293_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		sorting_nexin-13_isoform_X2_[Bombyx_mori]
Ontology
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008289 F lipid binding
GO:0009968 P negative regulation of signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
GO:0043547 P positive regulation of GTPase activity
Transcript
Level		FPKM:7.19 TPM:7.75
ORF EntryO_BomoOtmSK12337_complete:A_BomoOtmSK_comp14293_c0_seq1
Sequence
(Nucleotide)
TAACACAAGTTCTTTACGAACTTACCACGGGACCAGTTAACTTGGCGTGGTTGTTAGTAA
ATATTTATTATTTATTTATTTATGAATTGACTAAAAAAGTAACTATGCATTACGTAGTAA
AATAATATTGTTGTCCCTTCACCTTAAGTTTTTCATTTAATCGCGTTTCGATTTCGGGAA
TGACGTTTTCACACCCTATATATTCTATCTGACTATATTTGCATAAAGGGTGTCCTTTCT
TATTTAGAATAATTGTTTTTTTAACTTTTCTTTTCAATTCAACAGTTAAATAGTCCAAAT
CTGAATGGTATCAGAACACAACTTGAGTATTTTTCATATAACAGAATTCTTCTTCGGCGC
TGATACTCTAGGAGAATTCGTGTAAAGTTTCTTGAACAGACCTTGTATGTTGTTGTCGGG
AAAGAGATTGGTTAGGGTTACTTCCAACAAAACGAATATTAAGCGTCTGTTGATTTCTTG
TATTTGGAATAAATCGAATACTGTGAGGAGACCTCTTCGAGCTGAATCAGTACCGACTAT
ATGTTTGAGATCATCAGAGCAGGCCGAGAGCAATGCAACTTTAGCGGCAACCCTAGTTCT
CGCTTTAGTCGCCGCATCCCTTTCGCTGTAACTGGCACTGTGTCGGCTAGTTAACCATTG
CTTGAACGTTTTCAAATACTGAACCACGTTGCGAGGTGACGTCAACGACGATACCAGTTC
TAAAACTTTCCTGTTCACGCGATCCGCAATGAGGGTTCTGAGTGGTGCAAGTAGTCGACG
TCTGAGCCACAACCCTCGGATGCCAAGCACTTCTTCCAAGAGCTTCAGCGCCATGCTTTC
ATCGCCGTCGTCTTGTCCGTCGGTCGCGTTGCCGGTTTTAATGCCGTCATAGTAATTTTC
AGTGTTCTTTCCTTGGAAGACCTTTGAGATTCCGTCCATAACTCCGTCGACAGTGTTCAC
GAACTGATCCGGCATATTTTTCAATGTCCTCATTCCGGCTCTCAGGGGGTTCACGAGAAG
CGCATCGATCGTATTACTATGTTTTTCGGTTTGATTGACCGGACTGAGGAATCCCCCCAA
GTAGTCCCGCGACAGCAGCGCCATGTACTTTGCCTCCCTCGAAAGGCTGGCCAGAGTCTG
AAGGTAGCCGTTCAGTATCCGTTTCCTGTTCTCCAAAACTACTCGTGACGTATTCTGAAA
CGTTTTTTTAGCCGGAAATGGAACGTTCCCAAGTTCTGGCCATTTTTCTTTAATAGAGCA
ATGCAGGTCATAGAAATCACTGTATCTCCTATATATGTGCCACACCTCGTTGTCTGAAAG
TCTCGTAACGGCTATGGCGTATATACCAAAGGCTCGACCTTTGTCTTGTACTAGTGCTGT
TTCTATGATACAAGCCGATAGCGGTGACAGTAAATTTTTGGCTTTCCTACTGATTTCCGT
GTGCGACATCGACAAGCTGGAGTTAGCTGTCAAACTTGAGGGTCCTGCACCCTCATTGTT
CATCCTTTCAGCCAAATTTCCAACTATATCAGACCTTGAACGGTTATGTCTTGTACCGGG
AACGTGTAATAAGTCACCGCTGTACTTTTTAGTGTCCGATTTTGGATCGGTTTTCAGGTC
ACTATTACTTCTGTAAGTACCATCCTCAGTTTCCATCATAAAATCCGCTTGCCAAGAAGG
ATCGTCCTCTAAAGCATCGCAGACGCATTTCTGCAGCTCGTCAAAACACACAACTGGATT
GTTCGTAAATTCCTCTCCTTCAGTTGTGATTTTACGGACGAGTTCCGAATAACAGTTCTC
CGGCACGCCCATTACCGGCGGTTTGTTGGGCGATAAAAACAGATCGCACAACTCGAGTGC
GGACGAACGTAAGTTGTCTATGACCTCTTTCGATGTGTGCGGAGCGTCTGACTCATGGAG
CTCTATCTCTAGTAAATATTGCGCGTTAGACTTCCACGCTGCTGTTGCTCTCAAAAACTT
CAATGTTCTCGCAATTTCCTCGGACATTTTTTGTGTATTCAAATTATTCAGAGTACCTTC
TTGAGGACCTAACGTAGCCCTTCTGGCCTGTATTATCCTGGTCACGTACTGTAACGAGGA
TAATTTCTGACGATCCTGAAGCTCCCATTCGCCGGCGCTGTCTTTAGAATGTAGTTTCTG
TATATCCTTTTCTACTAATTCTAAAGTTGCGTCCAACTCTTCAGCATCCCCGCAGCTTCT
TATGACTATCAAAAACAGTTCTGATGGAAGTATTGAATCTTTGCAACAAGATTTTATGAT
CATTCTGTTGATATTATCAGGGTCACTCATTAAGCTGATTATGGGGCGTAAAACAACGGC
TGATAAAAGATCAATCAAAATCGTCTTCATTGCATGACATCCCCATGCTTCTTCTGGAGC
TACCAAATACAATATAGCTTCAGATACCTCACAAAGGAGCTCATATTCTTTATCTGTATC
ATCACAGAACACATCTCTACACATTTGTTTATTTTCTATAGCACATTCAAGTTCAAAAAA
TATATCTTTTAATGTTTTCCCTGTAATATTTTCAGAGCTATCATAAAATTTTGATTTACC
AAATATTTGAGAGTCTGGCAACCAAGATAAATCTGTTTCACTCTTGTTCCTTCTGTGTGT
TTTCTTCTCATCCCTTTTTGGACTTAGTTTAGCAGTATCATTTGCTGATTCTTTGGCATT
CATTAACTCTACATGTTTCAGGCGAACTCTTGATTGCTTAAACATCTTCAAATGAGTTGT
TAGTTCTTCAGGAAATCTTGTTGAGAGCAAATTAATCCAATCCACACATTTTATCCTATT
AACTACATTAGCACCAGTAGCAAGCACCAAACGTTTTATTGCATGCTTAGTGAACTCATC
ATCATTTGTCAAAATCTCATACCATGGTGTAACATAATCATTTATAATTATTACAATTAT
TTCATTTAGAAATGAATCTACAGTTTCACTTCCTGTTATTCTACTATCAAATTTTAATAA
AGGTACCTCTTTTTGAAACTCTTCTAGAACCTTAGGAAGAGTAATAGAGAAATTATTACA
TTGTAATGGATCATCAGGACTGTCTATATCAACAGAAAATATTTTTTTATCATAAACGCA
ATACAGGAATGTCAATACACCGAGTATGAAAGAAACAATAAACAACAGTAAAGAAAAATA
GATTCCAATTCCAAATAAACCGGTGATTATTACGCTAATCAAACCAAACCATCCTGCAAT
CTTTGCTATCATATTATCGAATATAGCGTTTTGTTTTGATCTAATTTACAAATGCCTATT
AAACGCTCAAAATTCACGTAAGAGACGAAAATTATTACAAACTTTATCCACATATTTCTA
ATTTGCAAAAGAG
(3373 bp)

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