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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14263_c0_seq4
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		ubiquitin_thioesterase_trabid_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007010 P cytoskeleton organization
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016055 P Wnt signaling pathway
GO:0016477 P cell migration
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035523 P protein K29-linked deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:0070536 P protein K63-linked deubiquitination
GO:0071947 P protein deubiquitination involved in ubiquitin-dependent protein catabolic process
GO:1990168 P protein K33-linked deubiquitination
Transcript
Level		FPKM:0.37 TPM:0.39
ORF EntryO_BomoOtmSK12250_3prime_partial:A_BomoOtmSK_comp14263_c0_seq4
Sequence
(Nucleotide)
CTCCGCGCCGCCGCCAGCCCGCCCGACGTCTCGCGCCACACCACCCACCGACGGACCACG
CTCTCCGCTTCCGACATCTCATCGCAAGTCAGAAAATGTACAGGCAATAATTTCCCTTCT
GAATCCGTTAGCGGCAGGTATATCATATCTTCATTATCATCTTGTTGTTCCCGACAAATA
TACGAATGCCTATGCGAATAAGGCTCTATGGGTACTAGCGCGGAGAAATGTCCGCGAGTG
TATCCGAGGCATAAAGGCGATTTAGAACAAAACTGGGGGTCCCACAGTAGCGGTAAATAT
ATACCTTGAAACCGTGCAAATCCTAAGGCCTCCCCCCGGAAGGAATTCACAACGTTGACC
CCGTACACGATGATGGGACGACGCATCACGTGAGCGAGGACGAACACGTGGATCTGATGC
AGCGGCGTGCCGGGTCTGGCGGCGGACGCTAATATCCTGCTCCACTCCGCCCTCAGCTGC
CCCTCCTCGGGCGCGTAATGTAACAACGACGCCTGCATTCGCTCCCACGCCTGCCAACGC
TCGTAGAAACTCCTGTGGGCTTGGTGCAGCGAGTCCGCCAGCGCGGTCCGGAGCGCGTTG
TTCCTGTCGAACACCCCGTAGGCGGCCTGGCACACGGCGTCGGGCAGGCAGTCGCCGGCC
GAGCGGTTCCAGAGGGCGTACAGCCGGGACCCAAGGTTAACGGTGAACTCCAAGCTCCAG
TTTATGAGTGGAGGATCCGCTTCTAAAGTCTGTTGTGCTTCTCTGTCCAGTAACTCGGAG
AATAGCTGCTCTTGTATCGCAGCCGGTAACTCCTCGATATAGAACTCGTTGATGTATCGA
CATGGAAAATTTCCTTTCTTCTGCCTTAAGCACCCCGCTATGTGCCGACGTATCGCTGAC
GCCAGGTCCGGCGCTATATAAGAGGGAGATCGTTTCAGTCCGGGTCCGCCGCCCGATATC
CGTGACAGTAATGTTGATAAAATTTCTTGTCTTTGAAATCTGATCGCTAAGTGTACGAGC
GTGTATCCAGCGTCGAAGGCCGAAGCTCGGTTGAGAAGTTGAACTTCGGCGTGAGTGAGG
GCCCGGGCCGGGTCACCTCCACTCGACAGATATGTCTCGACCCTTCGAGATTCACCTTCC
ACTACGCCGAGACAGGCCTGCAGCCATATCCAGTCGATGTTGCTGGCGCGTCGCTTCGAT
CTCCTCGTGCTGCCGTCTACGTCGTGCAGAGACGCGGTTTGATTGTTACATATTTCGTTT
ACACCTGGGGGTCTCGGGAGCCTGGGGTCGCACGGGGGCGAGTGGGCCGGGTTAGGGTTG
CCGTAGCCGCACATCGCACACTTTATCGACTTCGGCCAATTCTCGTACGTGCACGTAGGA
CATGACCATTTAACAAGAGTAGAGGCACTAGTGTGACCTTGAGGCGATGATATCCTGAGG
GGTTTCAGTCTATCTGCTACGGCTTCCGCTCCACACGTTTCCTGTGATGGAAGAGCGCTG
GCGCCGTCCTGTAATCTGAATATGTCTTCGCCCAGTAGTGGCTTCGGTGATCTACACATT
GTACACTTTCGTGAGAGCGGAAAATTTTCGTAAGTACACATCTCACAGCTCCATTTCGAA
TTCTCGCACGGTGGCGCTGAACTCGTTGTCATCTGTCCAATTTGGGAAATGGTAGTGGCG
GCATCCTGTGTGATCGCCTCAGCCCCTGGGCCTGAAGCACAATCAATCCCCACAGACTGT
GATGCACTCTTTCTTGACGCATCATTCTTCGCCTCTTCACTCATTGTACACCAATTAGAA
CATTTAGAGCAAGAGTCGTTCCTACATGGACTATAAAGCTTTCATCATATAAAATACTTC
AATATTTGAACAGGTGCTCTTTGCTGCGTCGCCTTGTGTGACATCTAACGTTTCTGTTTT
ATATAGTGCGCAAGGTTGAAGATAGGACTCTTGGCAAGCTGCAATGCAAGATTTTGGCGT
CGTTACACAACACAAAACATCGTGAGAGATGCCATAAGGTCAAGTCTATCCAAGCATATC
AACGCACTCACGGTAAGAAACGATCAGATCGATCGGACTACTCCACAGTTTGTTTAGTTA
ACTTGGGATGAAACAAATACGGGGAAGACAGGAAAAACATAAATTAGTTAATGGAATTAC
AGTCAAGTTGCACGGTATTTTGACAAATTTTGGTCATGTCAAATGTTG
(2208 bp)

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