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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14242_c0_seq2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		WW_domain-containing_adapter_protein_with_coiled-coil_homolog_isoform_X2_[Bombyx_mori]
Ontology
GO:0000993 F RNA polymerase II complex binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010390 P histone monoubiquitination
GO:0016568 P chromatin organization
GO:0044783 P mitotic G1 DNA damage checkpoint signaling
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0071894 P histone H2B conserved C-terminal lysine ubiquitination
Transcript
Level		FPKM:0.34 TPM:0.37
ORF EntryO_BomoOtmSK12202_complete:A_BomoOtmSK_comp14242_c0_seq2
Sequence
(Nucleotide)
GTGACATGGCGTCCATCAAGATATAATACGGCCTTCTGAAAGGACTGTTTCTATGACAGT
GGAATTATTTTGCATTTTACTGAGGCCGTAATAAATCGTACATTTGCATTGATGGTAATG
CATGCAAGGAAACCACAGCGGATAAGCGATGGGTACTTTGAGAAGCATCAGGCCCATCCG
TATCAGAAATACAACTCTAAAAGTGAACGAAGAGTCGCAAATGAATATGTATCTTCTGAC
AATCGGTACACACCACTTCGATCACCTAATGGCAATGTGTCCTCACATGGCCATAACACA
CATTCAAGCCAGTCCAGTCATAGTCATCACCACTACAGTCATATGGCAGATGATAGAGGA
TATGTCACATCTAGAAATTCCTATATTCAGAAAATCCCCGAAAAGGAGAGAGATAGAGAC
TACAAATCCTCTAGGAGTAAGTACACAGATAGCGTTCGTTCACCAAAAGAGCGCATTAAA
GATTGTGAGAGAGAAAGAAGTAATCATGAGCGAAATGAATCAGAGAAAAAAATTCGAACT
AGCGGCATGAACATTAGTGTTAGTAAGAGTAATAAATATGATAAAAGAAGTGTACCTTCC
TCTAGTGTACCTTCTGGAAGTGAATGGTCAGAACACATTAGTTCATCAGGCAAGAAGTAT
TATTATAACTGTATCAGTGAAGTGTCACAGTGGGAGAAACCTAGAGAGTGGGAGCCCAGA
AGGACATCATCCAAAGATTCTAATTATTCCTCCAGAAACAATAGATATTGGAACAGCAGC
CGAGATGAAGAACATCATGATCGTAGCAGACCAAAACATTCAGCTTCTACACACGATTGT
AAAGATGGGCAATCACTACAAGACATGGATATTTCGCCAGACAGAAGTACACCTTTATCT
GAGAATTCATATGGCGGAAGAGAAACACTAGATAGAGGACGGAGTAACTGTGAAAGTAAT
GCAGTTCCCCCCGTTGTCGTTCTTGACAATTCTAATCAACCTAGTGGTTCATTGCTTGCG
GCGGCATTACCCCGCATCGTGGCCGCACCCCCCGCTGTGACGGTACCGCAAGCTAACAAC
GGAGGCTCCTCGTCTCCTATCAGAGATGGCGCAGACACACCGCAAAGGGACGCGGGTCCG
CCGACGCCCACGCACTCTGAGAACACAGATCCACACGCCCCTCCTTTACACCTTGACCAG
GCATTACCAAGAAAGATGGAATGTCTGGGAAGCTATTCATCAGTTGTCGGCGGCACGCTA
CAGCACGCACCGCCTATGTTGACGCCTTCACTTGTGAATTACGTCCGGTCTGATTTAACA
TCGCATGTTACCGGTTGGCCAGCCGATATACTCGAAAAACAGGCGAACAAGTTTACGGAG
GAAGCGTATCAACTAGGCTGCTTGCAATGTACGCGGGTGTCATCTGAACTCAAATGTGCT
CGGTCTCTTGTACGTCACACCGAAATACAAGCCACACTTCAGGAGCAAAAGATTATGTAC
CTGAGGCAACAGATCTCACGATTGGAGGAGTTAAAGTCGCAAAATTCATTCATGTCGGAC
GACTAGGAATCGTGCTGGGGGCTGGCGTGTGCCACCCCCCTACTTGTTGCACTGCCGCTT
ATTATTGCGCGCTACATTTCCCAATTTAATGAGAGATCTCTCGCACGTCAATATAAAAAC
ATTGTTCATTCCGTTCTTTTCTATGTAATTTAGATCAAATTTATTACTGTTGTTGTGTTG
TGTGATTTGATGTGAAATAAGCAGTTCTCACCGTGGGTTTTGTCACTTTGAAATTGTATG
CTACGTTTACATAACTAATTAGGTTATAATAATGACAAAATGTTCTTGTTGGACATACAG
CTGAAAAAATATCAATAAAATAATAATTTAGTTGGATTACGGTGGTAAGAAAGCTACAAA
ATAACGCGGCGCGAGTCCTGCTTCGAAACCCCAAAGTTTCATTCATAAAAATTTTTAATA
ATAAATATTTTGTACATTTACTAATTGTCTGTATGTTTCAGTAATATCTTTCTGTTTTAC
TTTAATGTTAAATTTTTCATACAAATGGAATATTTTAAGGTTTTTTTTTTCTAATTTTAT
TATATTATGTGCAGTCAATTTAGTGATTATGATTATCAGTGTAAGAATACAGTGTTTGTT
TGTTTTCTGTAAAATGTTAAATTATTGAAACTGGATTTCGATACGTTTGTAACCGTCGGG
TCCATGAAAGGTTCACCAAGCTTACATGAATGTAGTCGATATTGAATATTATTGCTGTTC
ACTTGTGTAGGTGTAAACGGAATGTAATGGGGCGCCATTGCTGACCCATATCCCTACTTA
ACTTGTAATACCTACAAAGATAGTGCTAATCAAATTAATCTTTTTTGTTTAGAATTAGTT
TGACAATACGAAAATATGTAAAACTTGAAGACGTTGCGATTGTAAACGGAACTAAGATTT
ATAAACTTATTTTAAAAATGGCTCTTAATGTGAATTTTTCAAATAATTTTAAGATAATGT
TATATTATGTTGTATTATAAACGTGCTGCGAATTTATTTATGATTGGATGAATGTTTTAA
AAATTATACATTTTATTTGATCAATGGATGAACTCGACTTACTGGAGGAACATAATATGC
TTTTAAATTTATAATTTTGTGAAATGTGTCATTGCAAATATTCATTTTGACCAACCGTTG
TATAAAAATAATAATTAAAAAAATCTGGTATTTTGTAATAACATAATAAATAATACTTAG
ACTTATTGTATTCGTGTAGTGAATTAGTTGATTTTCTATAAAGTGAAAAAACATGAAATA
TTTTTCTGAATAATTT
(2836 bp)

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