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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14242_c0_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		WW_domain-containing_adapter_protein_with_coiled-coil_homolog_isoform_X1_[Bombyx_mori]
Ontology
GO:0000993 F RNA polymerase II complex binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010390 P histone monoubiquitination
GO:0016568 P chromatin organization
GO:0044783 P mitotic G1 DNA damage checkpoint signaling
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0071894 P histone H2B conserved C-terminal lysine ubiquitination
Transcript
Level		FPKM:3.20 TPM:3.45
ORF EntryO_BomoOtmSK12199_complete:A_BomoOtmSK_comp14242_c0_seq1
Sequence
(Nucleotide)
GTGACATGGCGTCCATCAAGATATAATACGGCCTTCTGAAAGGACTGTTTCTATGACAGT
GGAATTATTTTGCATTTTACTGAGGCCGTAATAAATCGTACATTTGCATTGATGGTAATG
CATGCAAGGAAACCACAGCGGATAAGCGATGGGTACTTTGAGAAGCATCAGGCCCATCCG
TATCAGAAATACAACTCTAAAAGTGAACGAAGAGTCGCAAATGAATATGTATCTTCTGAC
AATCGGTACACACCACTTCGATCACCTAATGGCAATGTGTCCTCACATGGCCATAACACA
CATTCAAGCCAGTCCAGTCATAGTCATCACCACTACAGTCATATGGCAGATGATAGAGGA
TATGTCACATCTAGAAATTCCTATATTCAGAAAATCCCCGAAAAGGAGAGAGATAGAGAC
TACAAATCCTCTAGGAGTAAGTACACAGATAGCGTTCGTTCACCAAAAGAGCGCATTAAA
GATTGTGAGAGAGAAAGAAGTAATCATGAGCGAAATGAATCAGAGAAAAAAATTCGAACT
AGCGGCATGAACATTAGTGTTAGTAAGAGTAATAAATATGATAAAAGAAGTGTACCTTCC
TCTAGTGTACCTTCTGGAAGTGAATGGTCAGAACACATTAGTTCATCAGGCAAGAAGTAT
TATTATAACTGTATCAGTGAAGTGTCACAGTGGGAGAAACCTAGAGAGTGGGAGCCCAGA
AGGACATCATCCAAAGATTCTAATTATTCCTCCAGAAACAATCGAGAAAAACGATCAAGT
TCACGGTCAGAGAGAAGAGAGTCGGAAAAAACAAGTAAACGTATTAACAATGCTTCAGAT
AGATATTGGAACAGCAGCCGAGATGAAGAACATCATGATCGTAGCAGACCAAAACATTCA
GCTTCTACACACGATTGTAAAGATGGGCAATCACTACAAGACATGGATATTTCGCCAGAC
AGAAGTACACCTTTATCTGAGAATTCATATGGCGGAAGAGAAACACTAGATAGAGGACGG
AGTAACTGTGAAAGTAATGCAGTTCCCCCCGTTGTCGTTCTTGACAATTCTAATCAACCT
AGTGGTTCATTGCTTGCGGCGGCATTACCCCGCATCGTGGCCGCACCCCCCGCTGTGACG
GTACCGCAAGCTAACAACGGAGGCTCCTCGTCTCCTATCAGAGATGGCGCAGACACACCG
CAAAGGGACGCGGGTCCGCCGACGCCCACGCACTCTGAGAACACAGATCCACACGCCCCT
CCTTTACACCTTGACCAGGCATTACCAAGAAAGATGGAATGTCTGGGAAGCTATTCATCA
GTTGTCGGCGGCACGCTACAGCACGCACCGCCTATGTTGACGCCTTCACTTGTGAATTAC
GTCCGGTCTGATTTAACATCGCATGTTACCGGTTGGCCAGCCGATATACTCGAAAAACAG
GCGAACAAGTTTACGGAGGAAGCGTATCAACTAGGCTGCTTGCAATGTACGCGGGTGTCA
TCTGAACTCAAATGTGCTCGGTCTCTTGTACGTCACACCGAAATACAAGCCACACTTCAG
GAGCAAAAGATTATGTACCTGAGGCAACAGATCTCACGATTGGAGGAGTTAAAGTCGCAA
AATTCATTCATGTCGGACGACTAGGAATCGTGCTGGGGGCTGGCGTGTGCCACCCCCCTA
CTTGTTGCACTGCCGCTTATTATTGCGCGCTACATTTCCCAATTTAATGAGAGATCTCTC
GCACGTCAATATAAAAACATTGTTCATTCCGTTCTTTTCTATGTAATTTAGATCAAATTT
ATTACTGTTGTTGTGTTGTGTGATTTGATGTGAAATAAGCAGTTCTCACCGTGGGTTTTG
TCACTTTGAAATTGTATGCTACGTTTACATAACTAATTAGGTTATAATAATGACAAAATG
TTCTTGTTGGACATACAGCTGAAAAAATATCAATAAAATAATAATTTAGTTGGATTACGG
TGGTAAGAAAGCTACAAAATAACGCGGCGCGAGTCCTGCTTCGAAACCCCAAAGTTTCAT
TCATAAAAATTTTTAATAATAAATATTTTGTACATTTACTAATTGTCTGTATGTTTCAGT
AATATCTTTCTGTTTTACTTTAATGTTAAATTTTTCATACAAATGGAATATTTTAAGGTT
TTTTTTTTCTAATTTTATTATATTATGTGCAGTCAATTTAGTGATTATGATTATCAGTGT
AAGAATACAGTGTTTGTTTGTTTTCTGTAAAATGTTAAATTATTGAAACTGGATTTCGAT
ACGTTTGTAACCGTCGGGTCCATGAAAGGTTCACCAAGCTTACATGAATGTAGTCGATAT
TGAATATTATTGCTGTTCACTTGTGTAGGTGTAAACGGAATGTAATGGGGCGCCATTGCT
GACCCATATCCCTACTTAACTTGTAATACCTACAAAGATAGTGCTAATCAAATTAATCTT
TTTTGTTTAGAATTAGTTTGACAATACGAAAATATGTAAAACTTGAAGACGTTGCGATTG
TAAACGGAACTAAGATTTATAAACTTATTTTAAAAATGGCTCTTAATGTGAATTTTTCAA
ATAATTTTAAGATAATGTTATATTATGTTGTATTATAAACGTGCTGCGAATTTATTTATG
ATTGGATGAATGTTTTAAAAATTATACATTTTATTTGATCAATGGATGAACTCGACTTAC
TGGAGGAACATAATATGCTTTTAAATTTATAATTTTGTGAAATGTGTCATTGCAAATATT
CATTTTGACCAACCGTTGTATAAAAATAATAATTAAAAAAATCTGGTATTTTGTAATAAC
ATAATAAATAATACTTAGACTTATTGTATTCGTGTAGTGAATTAGTTGATTTTCTATAAA
GTGAAAAAACATGAAATATTTTTCTGAATAATTT
(2914 bp)

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