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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14233_c0_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		antennapedia_homologue_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007383 P specification of segmental identity, antennal segment
GO:0007384 P specification of segmental identity, thorax
GO:0007419 P ventral cord development
GO:0007494 P midgut development
GO:0007507 P heart development
GO:0009948 P anterior/posterior axis specification
GO:0014019 P neuroblast development
GO:0042694 P muscle cell fate specification
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048542 P lymph gland development
Transcript
Level		FPKM:2.64 TPM:2.84
ORF EntryO_BomoOtmSK12186_complete:A_BomoOtmSK_comp14233_c0_seq1
Sequence
(Nucleotide)
GTTGTAAATAAGGATTTGTATAGACCATACGTATCTTAGTGAATGCGGATAGAACTTTAT
TACTCTCGTTGTTTATAAAGCTAATCGAGGATTAGATTGATGCAAATAACAATACAAATT
AATTTTATTAATCTTATGTGCCTCAATCAAAAACTTGGAAGATTTTTTTGTGTTTATGGT
GATCTTGAAGATTATGTTTTGTGGTTTTGGTGTCAAAAAATTGCATTTAATTAGTGTTTG
GCTGACAGTTTTCCTAGGATATTATTCTATTGTAACCATTACTGCTGTTTAACCGTCCAT
AAACAATAGGGAGCTAAATGATTGGCCGAGAATCAGATGAGGAGACACCGTCCGTCAACA
ACGCGTAAATCAACAGTGAGTTCAGCAAACGTCATTTAGTGAATGGATTCGGAAGTGTTT
GTGTTGTGACTGAATTGTGATAACGTAGTGTCGGCCCTTGGGGCCGAAAATCTGCGACGG
AAAATACGGACGTGAGCCGCGCGGGCTGCGGGCCCGCGATGAGCGCCAACAATTGCGACA
GTATGACATATTTTTCTAACGCTTACATGCCGGACATGAGGAACGGAGGCGGTCACGAAC
ATCAACAGGCGCACGCGCATTACGGCGCGGTGCCACAACAAGGGCACGAAATGGATGGCT
GCGATCAGCAGCTCAGGCCGGCACAGCATCACTACCCGGCGCAACCTGCGCCTGGAATGC
CCTACCCCAGGTTTCCACCCTACGACAGGCTAGGGTATTATCAACAAATGGAACAAAACG
GATACCGGCCGGACAGCCCTTCTCAAATGGGGCATATGGGTCCTAAAACGGACGGATATG
GACCTAACGGACACCAACCGGCAACTCCCGCAGTTTACACGTCGTGTAAGCTTCAAGCTG
CAGCCGCGACAGGAGGAGCAGTCCCCGGCAGCCCACCCTTAGAACAAGCACAACAAATGC
CCCATCATATGCACCCCCAACAGCATATGGTCCAGCACGGAGTACCTCCACACCAACAGC
ATCTCATGTACCCTGTGGACGACATGCAACATCAGACGCAGATGCCCCCTATGCATCAAC
AATCGATGCATGCACAGCAACCTCCTCCGCAGCAGCCCCCGCCTAATACGAACGCATCGC
TGCCCAGTCCGCTATACCCATGGATGCGAAGTCAATTTGAGAGGAAGCGGGGTCGACAAA
CCTACACCCGGTACCAAACCTTGGAGCTGGAGAAGGAGTTCCACTTCAACCGGTACCTGA
CGCGGAGGAGACGGATCGAGATCGCCCACGCGCTCTGCCTCACCGAGAGACAGATCAAGA
TCTGGTTCCAGAACAGACGCATGAAGTGGAAGAAGGAGAATAAGACCAAAGGCGAGCCCG
GTTCTGGTGACGAGCCGGATAACATGAGTCCGCCCACCTCGCCACAGTAAACCTTAGCTT
AGTCGGTGCGGTCCAAGTGAACGGTCAAATTGTTTCAGATTCGATGCAGCGATGCACTGA
ATTGCATTGTTTCCCAGCATTTTGTTTCGTCTTACGTCGAATTTTACGTTCGAATGCTTT
GATTAATATCTGAAACGTTCGGTCCGAAGGCCGAAGTTACTAGAACAGTTTAATTTGTAT
AAATTGTATGTTGGACTTTTCATAATAATTATTACATTATTATAAACTAATACGTAAACT
AGTGATTTCGAATAAAGAGTAATGATAGTGTGACGAAGAGATTTTTACGGTTGTTAAGTA
TAAATTAATTTATAGAGCAATCTCAATACCAATAATTACCAAAAACGCAGTGTTTAATTA
TTATTTACCCTAGTGAACTGCAATGACTCTTTATGTGATTCAATAGCGACTTTTTATATT
TTATCAAGAACACGAAATTTTTATAATTTTTCTTCTTTGAATTTCTCCATATATTTTTTC
TTTGTTTATTTTAACACGTGACGTGGTGTTTAGTTTTGACTAGGAAATTAATTTGGTTGA
ATTACTATCCGCAGCAGTCGTATTGTTAATTAAGAATTGAACTAGTGTTTTCTTATAAAC
AACCACGCCACAACTTAACGAAGCTTTTAAATTATATTTTCTATCTCAAAACCATAATGA
CCTCTTATATTTAACCATTGATAAGAAGGCAATTAGTATCCATATTGTTATAATTTAATA
TATTTGATGTTTTATTTCTAATTAAGATTCGAAATACTATTCTGTAAATACACGATAATT
CTAGAATTCGTAATGTACAATTGTTTTAGTGTGAATAATATTTCTGAGATTAATTTGTGG
GATGAGAGTTTATTTTGTGAATTTTTCTCTTGGAATTTTCCTTTTGAAATTCGGATCTAC
GAGTTACTTGTAGCGTGGATAGGCCAGTTATACAAGTGCAATGTATACGATTTTTGATGA
CACATATACGTAATTAATTACTGATAATAAGCGTAATAAGGAATCTATTATAATTGTAAA
ATGTTACGAGAAGCTTAAATATAGTAAAAAAAATTTGGCGCAAACAAAATT
(2511 bp)

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