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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14193_c0_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_1_precursor_[Bombyx_mori]
Ontology
GO:0004175 F endopeptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008201 F heparin binding
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0010573 P vascular endothelial growth factor production
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030199 P collagen fibril organization
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0032964 P collagen biosynthetic process
GO:0043206 P supramolecular fiber organization
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1900748 P positive regulation of vascular endothelial growth factor signaling pathway
Transcript
Level		FPKM:4.15 TPM:4.47
ORF EntryO_BomoOtmSK12092_5prime_partial:A_BomoOtmSK_comp14193_c0_seq1
Sequence
(Nucleotide)
GTTTAAGGCAACGTTTGAAAATACTCGAATAAGTTTTTTTTTATCAAAAATGAACAATAA
AATCCAGTTGGTTAATTTTTATTTGAAAAATTGTAGTAGTAATACACAGTTGTGGTTATC
AAAATAAACCATACTATTTTTTTAAGTAATCGTTTAGTTCCAAACGCTACCTTAAGAAGA
GGATAGAAATAACGCTTTGAAACTATGGGCCTCAGTATATTGACTATGACCTTTAAAAGA
TATAAGAATACAATGACATCATTTTTGTGTACGAATAAATTTTGCATAATGTACAGTTTT
AGAGTTATGTTTGTTACAATTTATTTAATAATGTGGACCTTAAGAAGAGATGTTGCATCG
TAAAATCTTTTGAAAACATTCTAGCATATAACGAAGTTTACGAACCTACATTATAACCGG
TTCGGTTTCTCGGTTCAGCGTAGTCCTAGAAGTTTGATAAAAACGCAGTTTCTACCATTA
ATTTGGACAGAAGCGCCGCTTCTCAGCCGTACAGTCTGTGCTGACGGCGGTCTGCGTCCC
TGCAAGCGTTACAGCAATATTTCCTGAACGGCGGCACCTCGCAGTTCCGGTGCAGCTGTT
CCAGTGTGAAGAGCTCGCAGTAGTGCGCGTGGTCGCGTTCGGGGCACTGCACTGCGACTC
TCAGTGCTGAGGGGCAGCGCCGGAGTCTGCAGCGCCGGCGTCGCTCGCGCGGCTTCGGTC
CGCATAGTAGCTCGTCTGACGCCGGACACGTGAGCGGACGCCGGGACACGCCGCGTCCGC
ACGACGCCGAGCAAGGAGTCCAGGGTTGCTCCCTCCAGTAAACAGGGCAGGGGATACGGT
TGCAGGGCTGGCGATGTGGCGGCTTTGACGACGAGCACATGACTGGTGACACGCTGTGTT
TGATAAACTCTCTCCTCGATAGCATGCTTGCGTTTGATGGAACACAGAACAATTGTCTTT
CTTGAACACCGTTGCTACCGCATGTCGAACTGCATTCTTCCCAATCGTCAGAAGTCCACA
CAAATTCACAACTGTGTGTATTGCATGATTCGTATCTAGGCGGTGGACATTTCTGATCTC
GATGACACTGGGCTGTTATCAATCGCACACCGCCACCGCAGGACGCGGAACACGGACCGC
GCTCTATCGACCACCTGTATTCCAATGGTCTCGTGCGTCCAGTTGGAGTGCTGTAGTTTA
CTGACACGTCCACACTGACCGCATCTTCTAATGTAGGATTAACTGGTATTGCCATTATCA
TCAAATCAGTTTGCAGTCTAGATTCTGACGTTATATAAATGTCCGTGTCGGTTTGATTCC
AGCGCAGGAGAGTCCCAGCCGTGATCGCCTCGCCTTCATAACGAAAGCTCTCTTTCAAGT
CTAAAATGTTGCTGTCCATTTCCACGATCTGAAGATTCTGAGGCACGCTCGGATCGTATT
TCAAGTAGTTGTCCTGAAGGGAGCTGATGTCGAATTTTTTGGAGTGCTTAGAAAGTTCTA
GAATCGGCTTGTCCCGTTTCCGTTCGCGCAGTGCAATGTGGAGGGGAATCGGTGTGGCTA
TGTGTATGGACAGTTGACGTGCTTCGTGCGGCACCATCGTCATGCGAGTCCAGCCGTTAC
CGAGTAATCTTGTGTATGTGTTAGTGTTGTTGTTGCAGTAGCCGTCTGGGCACCAGTTGC
AGGTTGTATCTGATGAATTGCATTGACCTTTCACGCACGTACCCTGGAAGCAAACGTCGA
AGGGTCGAAGGTAGCTGCAGGGCGTTCCGTCGGGTAGGGCTCCGAAATTGGTGGGCGACC
CTCCAGCGTAGTCCACACACGAAATTTCACAATGGTTGGACTCGTTGGCATGTAAATAAG
GTATGAGTCTGCTCTGTTGGCGATGGCAGAGGTCGGAGCGGATGTCTCTGGTTGCAGCGC
ACGAAGACCCCGCCCAGCAAGTCGCTACTTGAGATCCAGCACCCTCACATGCGCTCTCTG
ATACAAACCCTCTGTATTTGCATTTTCGTGTTCTTGTCCTGAGGCCGTAACCACAATCTG
CGTTGCATGCGCTCCACTCCTCCCAATCTCCCCATTCTGGAGTATGTTTGTTTTCAACCT
TAGTCTCTTTACTGTGGCCAGGCATCGGCTCGCAGACACGATCCACGCACCATTGGTTTT
GTCCACAGGGTGTTCCCTCGAGAGGCGGCGCTCGCTTTGACCGGCACACGTGAGGCATAG
CGCGGTGGGCACACCACAACCTTGAGCACGCAGACCGAACCTTTACGGATCGACACACTG
AGAAACCTTCTCCGAATTCAGTCCTGCACTGTTCATCCATTGTGAAGACATAATTTGAGA
GCTCCTTAGCACCACCTAGTTCCACACCCTCGTCAGTGCTACGCTCATGGAGGCACCACC
ACTTCTTTGATTTCGCATGAAATTGTTCCTTTGAACAACTTGACCAGGCAAAGTTGTGTA
GGGTAGCCAATACTGTCGGTGCCATTACAGAGCCTCGAAGCGCTTCAGACTGACAATTGC
CTTCTCCATCGTGGGTCAACCCTAATAAGTGAGCGAGTTCGTGTGCAATTACAAAAGCAC
TGGTCAATCCTTCGTCGCGGTCGATGGCGGCTGACCGCGTTTTGGTGCAGACCCCACCTA
CGGGAGCGAACCCGGAAGGCCCTCCAAGCTGGGATCTCGTTAACCATATTGTGGCGTCCC
ATCCTGTGCTACCTTCAGGTAGCTTCATGAGATGTCTATAGTTCCACTTGTTAATAGCTT
CTAACGATTTTTTTATGTTGCCGTACTTCAAAATTATGTCCTTGTCCTCGTAGAGAAACA
ATTTGTTGATCACTAACGTGATGTTAGAGCCCAGTGATGGGTCATTGAAGATGGCACTGA
CAATATTCATTAAAGCTAAAATATAATGTTTGACACGTTCTCGGCCATGAAATTTCAACA
TGGTGTTGTCGGCAACGATGGCCAGTTCAAGCCAAAGACCCTTTACACCTGACGCAGGTC
TTCTGAACAAATGCATGTCATGGAAGTACTCTTTGTCGGAATGATCGCTGTGCCGCGGAT
GTACGTGCGAGGTCGGTAACAGGTCATCATCTTCATCGAAGTCAAGATCAAGGTCGATGA
CCGTATCACCGGTGAGGTTGTACTCGGCCGAACGCTCGCTGTGCGTAACGTCTCGGCGTC
GTAACACGTGTTTCTCCTGCGTTCGGGTTGGCTGCAGCACGAACTCTTCACCGCCGACCT
GCAGCAGCCCGTACAACTGTCCGTCACATTCGGTAACCGTCACAGCGGAGCCCTCTTCAT
GAAGAACGCGTCCCGTAAAAAACTGACATTCCTTATAATAAGGCGAACGAATAGCTTTGT
TTTCTTTTAACTTGAGATCCCAACCGAGGAGTCGCAAGTGATGAGTTTCTTGCGCGTGCC
TGCGATGTCTCGGAGTGAGCAGCAAGGGCTGTCTCGGCGGTGTCCAGGCGCCGGCGCCGA
CGACCGCGAGGAGCAGAGACAGCGCGGCCCAGAGGCAGCACGGCATGGTCCGTGCGTCGC
CGCGAGCT
(3548 bp)

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