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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14167_c0_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101743421_isoform_X1_[Bombyx_mori]
Ontology
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0001947 P heart looping
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008016 P regulation of heart contraction
GO:0010842 P retina layer formation
GO:0035881 P amacrine cell differentiation
GO:0036302 P atrioventricular canal development
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0060579 P ventral spinal cord interneuron fate commitment
Transcript
Level		FPKM:2.77 TPM:2.99
ORF EntryO_BomoOtmSK12021_complete:A_BomoOtmSK_comp14167_c0_seq1
Sequence
(Nucleotide)
AAAACTTAAGATAAACTTAGATACTACGAAACTATATTTAATTACAACATAAAAATGCAG
TCACACAATTCACAGCTATTATTACAATTCGAATAATTTTATCTTAATCATATTAATAGT
AATTGAAAAATCACTGGAGATTTTATGTTAATTGTAGTTTTGTTGACCCAATTAATTTTC
TTAGATCATATATTTCAAGTCTTGAATGGGATATGCTTAAATAAGAGCGACTCTATTGAC
GAGCGGAGTTTTTCGTCTGCTTGTATGGGATTGTGTTGATACTGGTTGGTATATGAAGCT
GCTTCTTGAACGTTTCGCTGGATGTATTGTATAGTTTTCGGTCATCAAGTCAAACTTTAT
AGGCTTTCCAAAATCGACCTCTTCATACGAATTATCGAGAACCTCGACATCGCTAACTTC
TTCACCAGACTCGACATCTGTAATGTATGACGTTAATGATGACGGACCCGTCGCCAACAG
ACGGTACGTGCCGCCCACCATGCCCGTACCTTCCACAACTTCATCTACTTCTAACTCTTG
ATCTGACACTGTTCAACGGTTTCCTCTTCTTCTACTTCTTCTTTGACCTCAGGGTCGATC
TCTACGTCCGCGTCCATTTCAGTATCACCGTCAACATCTGCATCATCTTCGATATCGGTG
TCGCCGCCCACCGCACTGTACTTCATTTCGCCGCGCTCTAGAGCTTCTAAACTTTCTGGA
TAAACCATAGCCTTTTTTATAGCTTGTGGATCTTTCCTTGACCATTTTTGAACTTCTTCA
TCCATTTTCCCAACTTTCGAGGGATTCATCGCCCACAAACAACCTTTTCTTTGGCTTCCA
TTTGTAGAGGGCTTCTCAATTTTTTCAAAACATTTGTTTAGGCTGAGGTTGTGCCTCACT
GAATTTTTCCAGCCATTAGGTGCTGTTTTGAAATACGGAAAATGCTGGCACATGAAGTTG
TATATTTCAGACACTGGTAAACTTCCTGTTCTTGAATTCTTTAATGCCATAGCTATTAAA
CACGAATACGAGTATGCTGGTTTAGGAAATTCGCCTACAGTCTTCCCATGTGCACTTAAA
TACTTTGTTTGACTATTGTCTACTGTATAAGTATTACTAATGGAAGTCTTCATTAACTGT
CTACCATTACTTAACGAAGAATTATCAATTAGTATTGTCGCTTGATTCTTATTACCATTC
GCTAAAATTGTTCTAGATTGACCAATCGATTGAGCATCTAATATGTGGATGTTGCCCGAT
ATAATTGTTTTAGTTCCTATCTGTTGTGTTATTTTTTGGTTTGTGTTTAAAATTGAACAA
CTTTTACCATTGACCTTTATCAACTCCGGTTGAGCTTTTATTCGAACAGTAGACTGAGTG
TTCGACACTGCGGATACTTTAGATTTATCCAAATCTTTTAGTAAATCTTTGACTACAGTC
TTGTCGTTTTTTCTTACGTAAATAACCATCTGCCTCGCCTCTTCTGGTTCCTTTTTTATT
TTTATTTCCTCTGTTTCGTGAACTTTAGAGACTTTAATTGTGTTTGGAGAAAATGTTAAG
TGACTTTTTTCTTCTTTTGGACTGGCTAGCGTTGAATTGTGTTTCGATTCGGAATCTCTG
TTAGCCACCGATGAGAGAAGGACATTTGACGCTTCTTCTTTAACTACACTTTTTACTGGT
GTTTCGGCAAAGTTTGAAGGCATCACAGAGTTTGGATTCACCATAACGGCATTGGCTTCA
GATCCATATAAATCTAAATTATGAACAAAACTGGAACTGTTATTTAGCCACGTAGAGCAA
TTATCAGTGTCCATGTCGAGTAACGGTGGCATGTCGGAAAAATTTGTACCAAACGAATCT
TGAAAATCTGATATACTACTAAGATCTGTGGCTATTTCATTCTTGATGTCGATGTCTAGC
ATGTCTTGGAGTGAGTCGGTGATATACAAATCCATGTCTGAGCACCACGAATATTTATTA
GAGTAAATATCCTTTTGCTCAATAGAAAAATCCTGAATTTCGCACATTTACGCTAAAAAC
ATTATAAAATTGACAGATATAACACCACTCACTCCACATAAACCCACAATCTGTTTTACT
ATTTCG
(2106 bp)

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