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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14120_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_RING1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007275 P multicellular organism development
GO:0007419 P ventral cord development
GO:0008270 F zinc ion binding
GO:0008278 C cohesin complex
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0022008 P neurogenesis
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030713 P ovarian follicle cell stalk formation
GO:0031519 C PcG protein complex
GO:0035102 C PRC1 complex
GO:0035518 P histone H2A monoubiquitination
GO:0045498 P sex comb development
GO:0046872 F metal ion binding
GO:0051321 P meiotic cell cycle
Transcript
Level		FPKM:8.05 TPM:8.68
ORF EntryO_BomoOtmSK11926_complete:A_BomoOtmSK_comp14120_c0_seq1
Sequence
(Nucleotide)
TTTTCACAGATCAACATGGACGACGCGACGTCTGTCAACAGTGTCAACTAAAGAAAAACA
AAAAGCTTCATATTTCCGTGGAATTTAGAATATATTGGCAAAATGTCTTCAACAGAGCCT
TCGCAAAATAAAACATGGGAGCTATCCCTTTACGAGTTACACCGTACTCCACAAGAAGTG
ATCACAGACGCGACGGAAATAGCGGTCTCCCCACGAAGTCTTCACAGTGAGCTGATGTGC
CCAATCTGTTTGGATATGCTCAAAAAGACAATGACTACAAAAGAATGCCTCCATAGATTC
TGCAACGACTGTATTATAACCGCTTTGAGATCGGGCAATAAAGAGTGTCCGACTTGTAGA
AAGAAATTAGTGTCCAAACGTTCTCTTCGACCGGACCCCAACTTCGACCTGCTCATATCC
AAGATATATCCCAGTAGGGACGAATACGAGGCTCACCAAGAACTGGTTCTGGCTAAACTA
AGCATGTCCCATTCACAAGCTTCTCTCGTCAATTCTATAACCGAAGGCATAAAGTTACAG
TCACAAAACAGGCCTCAGAGATCAAGAAAGAACCATGACGAGAGTAGCAATGCGTCTAAT
TCCAATGGTAATGTAGAAACAGCTCAAAATGGTAGTAATTCTGCCACTCCCAAAGATGGA
ACTTCTTCAAGCGGAAACCCTGCACAATCCGGTCAGTCAACATCGAATCCTGCTTCAGTG
AGAAGTACACCATCTCCAGTCCCGTCGAATGTTTCATCAGTATCCAAAAACACAAGTACA
ACTAAAAGGGCCAAATCGGTATTGACTTCAGAGAGAAGTGAAGAAAGTGAATCTAGTGAT
GGAAGAAGGAGAGAACTCAATGGATACGGAAGGAGAAGGGGAGCCCCTAAACCCCAATGA
GATAGAGCTAGTCTTCAAACCCCACCCTACAGAGATGACTGGGGACAATCAACTTATGAG
AGCTCTTTGTGACAATTCTGTGAGATATCTAAAGACAACACCCAATGCTTCTGTCGATCA
TCTAAGCAAGTACCTAGCGATGCGTCTCACTTTGGATCTCGATGCAGAGCTACCAGAGGC
ACTCCGGCTTCTGAACTTTTGTATTTACGTAGCACCTTCGCCTGGACAGTTTGTGCTGTT
GGCTGGCTCACAGACCCTTCGTCAGATTATCGATAAGTTCTGGAAGGTCAACAAACCTTT
GGAGATGTTCTACTCCTGGAAGAAAACCTAGAAGTAGGATACATTTTAGTTATGTGCCTC
TTTACATAACTAAAATGGTGATATGCAGTGAATCCAATCTCATAGTGAAATCGAAATATA
TATAAATAAAAAGAATATTTTTTAAATTGAGACATGGACTCTTATGATAATGTGATAAGA
AATGTGACTATAATAAAAAAAAAACAAATCACAATACCTATAACATTTGTAAATTTAAAA
CAAATCAGTACTCTTTTCAACCTAATTATACTAAGGAATATTCTTGAAATTGAAGTAGAT
TGATGCATTATTGGTGTTTTAAATAGTTAAATAGTAACATTTGTCATTTTGAATGAACTA
ATATCAGTAACGGGACGTGACCATATTGTATAATAGTACACTTTACTCATAAATGGTGTA
GTGTTTTGTACAACTTTG
(1638 bp)

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