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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14111_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		pre-mRNA-splicing_factor_Syf2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0071004 C U2-type prespliceosome
GO:0071006 C U2-type catalytic step 1 spliceosome
GO:0071007 C U2-type catalytic step 2 spliceosome
GO:0071008 C U2-type post-mRNA release spliceosomal complex
Transcript
Level		FPKM:10.75 TPM:11.59
ORF EntryO_BomoOtmSK11913_complete:A_BomoOtmSK_comp14111_c0_seq1
Sequence
(Nucleotide)
GTAATGTATTTTTTATGAAACTATAGTTTGATTTTGCTGTACTAGCATAATGAATCGTAA
ATAATGCTAATAAAATATTTTAAAAATATGTTTTTTTTTAAATCAGGTTCGATTTTTTTC
CGTGCCGTCTCCGCTTTCAGAAGCAGTCTCCTAACACCCAGTATATAGTGCATTAAATAT
TTACGTATATCAGAATATACGCGGGATGCGATGGCAATAAGGTTCCAAGGGCCAAGTTTC
AAAAACCTTAGAAATGTCACCCTGCTAGCTGTTGCGCTTATTAGCCATTACTGAGGGCGT
AAGCTAAAGCACTCAAGTTATCTGGCTCATATTAATCTAAGATAATTTTTACTTTTCTAT
CCAAGTTCCTAGGAATACAGATAAAAAAAATTGATCCAGATATAATTTTGTTTATAAAAA
TTCTATTATAACTAATATGTATGATATACCTATATATAAATGTTATATATAAAATATATA
TAAATGCTATATACATAATATAATATACATATGTACATTTTAAAATGTGATATACATATA
ATCCTATTCTTTCATTTATGTTATATTTTAAGAAATGAAATGCTGGATCATTTTTTTATT
AAAATATATTGTAATTGTCTTGCACATTGAAACAATACGCTGAACTTATAGTACATTTTG
ATATTCCTGTTTTATTTACAATGAATCTAATCTAAAATGTTTCTATTACAAAATTGAATA
GTTTACATAAAATGTAATATTTCTTTTTAAGATACAATGTTCTTGCTCAGAATTGTACTC
AATTTGTATGGGTTTTTTAGGTATTGTGGCAACTGTAATGTTGTTCAGGCGAAACAAGGA
ATATTGCTAATAATAGTGCTTTTACAGAATTGTAATATAAATGTAATACTATTTGATATG
TAATATTTTTATTTAATAATTACATACATTTATCACAATAAAATTGTTATGAAAATTTGT
TTAATTTTGATGTTTTACTTAAAATTAGTGCCTTTTCAAATTTAGAAGATGTTGCTATTC
CTTAACATGTTGATCGCCAGACTAGTAACCATGTTTAGCTTAGTGGGTCACTGCGGACAC
TCTATGACTGCCAATAAGTCAGGTCCAGGAGTCACGATAGACACCATGTGTTGCCATCTC
CTCTGGTTCAGCATGTGAGCTTACCTACTATGAAGTTGGAATAGCCCCTGAGGGTATCAG
TGAATAAGTAAGGAAAAAACTATTTGCATTTCTCAAAAAAAAAAGTACACAATTACATCT
ACGGTAGCTATGCCCTAGGGTTTATTTTCTATAAAAATAAATGTTAAAAACTATGATTGT
TGTATGTTATGAGAAGTAGTAGCATTCATTTATGTAAATTGGTTCTGATATTCTAACTTT
CATTATCAAAGCAGTTTTATAAAAATGTTATTATTTCATTTTTTTTCTTCAACAAGTTAG
TATTGCATTATTGCATATATCTACAATCTAAAATACCAATATACATTTAGTAAATATTCT
GGTGTTTTTAAGCTAAATGGCAGTGCCTCTCTCCAAATTTTGTTTTATTTCAGCAGTATG
CTCTCCATAAAACCTTTCCAATTTCTTATTGAATTTAGCATTCCTCTCGTTGATATAATC
AATATCAGCATCATCATTATGAATTCGTCTCCTCGAGTATTTAGTTCTCTTTGCAATCTG
ACCCTCCAGATCATCAACCATTTTGTCTACTGCCTCTTTACGATCTTCGTGCATGCCATG
TATGATGACGTTGGGGCCTCCATAGAATGCTTCACCATACTTTTGCTTTTGTTTCTCATA
CCGTTCCATATCCGCTGGTGGCATGTTTTTCACTAACCTGTTGTATTGTCGAATTGTAGC
GTGTTCATACGTCGAGAACCCTTGGTCTGGGTTCTTTTTCTTTTTTTTACGTTCGAGTCG
TTCTGCTTCTATCGCAGAAATATTCAACAATTTGACTCGGTCGTAGTTTTTGCCTTCTGT
TTCTGCTTCTTCTCGTTTCTTCTGATCCTCTACTAACCACTCTGCCTGGCGCCGTTTAGC
TTCATAGTTCGTTGGTAGCTTGTTCCTAGCCTCTTCTGCTACGACTTCTTGGTGGTTTTG
TGTCCTAGCTTCGTTTCGGGCGGTGTGTAAGTTACGCAGTCTCTGCATACGTTCAGCCTG
TTTTTCGACAAATGTTTTTTCTTTCGCTTCCTTATTTTGTTCACATTTTTGAGTATTCAT
TTTGTAGGTAAACTGTTTTCTTTCCTTTTGTTTTCTTACAAAAATGACTTACCTACCTAT
AATTTTAACTTTTTT
(2295 bp)

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