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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14075_c0_seq2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		transcription_initiation_factor_TFIID_subunit_4_isoform_X4_[Bombyx_mori]
Ontology
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001092 F TFIIA-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0022008 P neurogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:1.05 TPM:1.13
ORF EntryO_BomoOtmSK11821_complete:A_BomoOtmSK_comp14075_c0_seq2
Sequence
(Nucleotide)
CCCGCCTGCGGGATTCGAACACTGTTGCATCGCTAGATACGTATGCACCGGACATCTTAT
CCTTTAAGCCACGACGACCACAAGTTGCTTTTTTCCACTCCGACACGCTTCCTTATATCC
TCGATATGTCATTTGTAATATCTATTACCTGAATACTCCTAACTAATCAGTTATATATAA
TTTAAGGAGCCCGAAAGTTCACAATTTTAGAATAAGTTATTCTGGTACTCTTTCCTTCGA
GAGGCAACTTATTCTGAAAGATGGTCATAATCATTACCAAGACAGTCACTTCGCTGCTCT
TAGCCCAATATCTTCTTAGTCTCAATACATGTCGTAACGCTTATAACAACTATACTTTCC
ATCAATTCTACCAGAGTTCTATGTTATTATTAAAACAATCACTTTATTTGTCATACCGTG
CATATCGACCAAAATCGGTTCATCAAACCACCGTTTAATGTATTGAATGGCTCAAGTTTA
ACCATCATGTAGTTATTATTGTATATCAATTAAATTTTTATATAACATCAACAAGGACTC
CATACAATAAAAATCGAGTTCCAAGGCATTTTGACTTTGTACGAAAGACGACTGATAAAC
CTACCTGCTGCATTATTCGTTGCACATGTTTTCAAATTGATCTGTCCTAAAATGAATCAG
TTATTATTCAACAAGTTACGCATAGTCACCGTTTAACTAGAATCATTATTAAGGCTTGCT
TCAAATACAACATCACGACGGTATTAAGTCAATATTTGAATAATCATTAAAGTCTCGGCT
ATCTAAGACGCAGCATTTGTTGTATACTGTTGTACACAATGACACAGCATTGTAACAAAT
CAGGATACTATAACAAAACGCTTTCACCATTCCATTGGTATGAACATTATTCTCCAATTC
ATTTGGTCAGTATCAGGAATAACTTTACTGCGTTTAAATCTTTAGACAGTTCTCACGTGT
AACACTTTCGGTGCACACGTACGCTACAGTAGGAGCGTGACGTTTTCAATCATCGTATCT
GGTCGCGAGCCAGTCGATGTAACGGTCGACGTCGCTCCTAGTGTAGGTTTCGGCCGCGGG
TCACTTCAAGTAGCTCTTGTAAAGCAACAACGATCGGCAGGTGTCTCTCTCTTGCTCGAG
CAGGAATAGCATGTCACGGTGATTGATGCGCTTCAGACGAGTCCGGAGGGCTAGTTGACT
TCGGCCAGGAAATCCAGTAGTCTGCGGTCCAGGAGTGGCTGTGTCTCCGGAGGCGCCTGG
TGCTTCTAGTCTTGGTTTCTTTCGCGGTCCAATAGCTTGTAAAGCGGTCAAGTTGGCTTC
CCTTTGACGAAGCTCCTCCAACTCGGCACGTTGCATTTCTTTCGCCTTAGCCTTCAATTT
CGCCTGTTCGGGATCCTCGTTCTTCGATCGAGACTTGGCAGCCCTAAGAAGCATTTCCCT
CTCTGAGTCTTCCCTGCGTTTCTTGTCGACCCTGTCCAATTCTTCTAGAAACTTAAGTTG
GCCCTTTACATCTTGAGTCACTTCATAACGGCTATCAGACTTTATAAAATGATCGATTCT
GTGCTGAGCTATCACAGCTAGTTTCTCGATAAGATTTTTAAGTCTCTCCTGTACTGCATG
ACTGATGAGGGCTGCCACTTCCCCGGTCGGCTCGTCGAGATTGTGTCGTGCTATTATGGC
TTTAACCCTGGCTTGCATCACGCTCGTCGGCACTAAATATTCATCTTTGCACGATCTAAT
CTGAGTTCCGATCATCTCCGTGGAGCCGAGAATCCTCTGCGACTCTTCCGCCAAGTTGAC
TCCACCCATGGCCGCTACGTCATTGATGTCGTCATCGCCAGCCATCTTGTCGTCGGTGAA
CGGTTGCGAATAACTAGAAGATTTCTTCTCCTTATCTTTCAGAAGCGACTTGCCAGGAGT
CAGTACGGTTGATAAAGCAGCTGAAGGCAATTGGCCTCTCGGGAAGGCGCCCTTGTTGTT
CAACTGCATCGACTTGCCGCTACTGACTTTGCTAACGTTGATCTTGGTGTGCACAGGAAT
GTTCTGTAGAACCGCTATCGTACTGCCCGGTTTCGATGGTGGTTTTTGCTGCAATTGTAT
GTTGGACGTGGCCACCACAGGTTGGGCGGGAGATGGCATCGTAGAGAAAGCTATGTGAGG
CGCTGGAGGGTTTATTCCTTCAATAACAAGCTCTTTTGTAACCAAAGATTGTCTGAGCAG
TGGCAAGCTTTTCTTTAAGAATCCGATAAGGCAGGGCTGAGGACTCGCGTTAAGTAATCT
TTCAAGTCTGTTGCAGAACTCTTCTGGTTCAACTTGGGCGTCGATAAGTTCCTGGATCAA
ATTCCGTACATTCATCTCCACTGATGGAGGCTCTTTGCTTGATAAGTCCAGGAGATTTGC
TAAGAAATTACGGCATTTTTCCTTAGTGTTGTCCGAAGGTTTAACAGTTGTTACCGTTGG
GGGTTGAGATTGAGGCGGAGGCGTACCGCAGTTTATATTTGGTATAGATGCTGGTATAAC
AGGCGTTGCCATCGGCGCAGCTGGCATCTGACCCGGTATAGGGCTGGAGGCCATGCTTGT
TGACACCGTCGCGACGCCAGGATGTGCCGGCACAGTGGACAGCCTGATGGTTTGAGGCTG
GGGCGTCGTGAGAGAGCTGGCCGCTGGAGCGGGACCCACTCTCAGCAACTGGTATTGACC
ATTCTCTGTCTTTAACAACAAATGACCCTGCTGGCCCGGTTGTAGACTTGGTAGTGTTTG
CAGCGTTATGCCTGGTCCTGCAGCTCTGGTGCCAACAACTTGTGGGGTGCCTATCACTAC
TCTTGGTGATACTGTTGCTACTGACTTTTGTGCCGCAACTGCTGGAGCACCAGCTCTCAT
ATTCAGAATCTGAACATTAGGGAGTATTGTGGGCTGACTCGAACCCAAGTTCTGAGTTGT
TACAACTACATTTTGTCCAGGTTTGTTCAAAGTCATTACATTTGGTATTGAACCGGACAT
GCTTGAATTGACTGTCATCGGTACTGTGACCATTCCAGACTGTATTCCCACTTGGCCCGA
AGACGTCCCCTGTTTTAAAACTAAAGGAGGTTGCATCGCGTCTACTGACGTTATCAAATG
ATTTTGGGACGAGGACAACCCAACGAAACCGTTCGGAAGTGACTGAGCGGGAAATGTCAC
CGAATTTGGGTTAGAAAATGCTTGAGCCTGAGAATATATAACTTGTATGTTATCGTTACA
ATTGGTCACAGTACCACCCGGTGTCAAAGAGGAATAAGTACCAGGAACACTTGATTGGAC
ATTATTACAGGACGTGCTATTTGTCAACGAGGGTCTGTGTATACTGTTCGCGGCAATACC
GCAGCTAACTCCGCCTGTTGTATATTTATGACCACTTATAATAGAGCCCGCGTTCGAACT
TAGCCCGGGAAACTGAGATGATAAAACGTTCACTAAAATATTTTGTGACGGCGCCGACGA
TACGTTAGTAACTAATTGGTTTTCGAGAGTGCCCACGATCGCGTTCACGGCTTTCTCGTC
GACGTCTGTGGACAAAGCTTCCTCCAAAAACTCCGTTGACGCCATTTTCTACAAATCAGC
GGATATGACACTGGACGGTTACAAACCGG
(3629 bp)

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