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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14020_c0_seq1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:9.28 TPM:10.00
ORF EntryO_BomoOtmSK11717_complete:A_BomoOtmSK_comp14020_c0_seq1
Sequence
(Nucleotide)
CACCGCCTCCGCCTACCGCATGGCGCTGCGCCGCCACGCCGCCGCCACCGCGCCCGCGCC
GCGACAGCTCAAAGAGCTGGGTAACCAGAGCGCGTCCGTGATCCCGTACGACGTCTCCGT
GGACCCGGTGTCGATCCATCGTCCCCTGTCGCGGTACATTGCGGGCCTGCACCTGCTGCT
GCACCGCCACGGCCTGTCCTACCACAGCCCGGAGTTCGATCGACAGGACAAACAAAAATC
GTCGCCGGAGGAACTCATCGAGCCAGTGCTGCAGACAATGGCGATGATAGCCCAAGTCCA
CGCCGGCATGTGGCGGAGGAACGGCTTCGCCTTACTCAATCAACTGTATTTCTACCACAA
CGTGAAGTGTCGGACCGAGATGTTAGATCGGGACGTCGTCATGCTGCAAATTGGCGCATC
TCTTATCGAAAGCAACGAATTCATGATCCACGTACTGAACAAGTACAACCTACTGGACTG
GGCGTCGCCTGACTTCGAGAAGCAAAGCATCGAGGACGACACGCTGAGACACACCATTAG
CATGGTGGAAGAGTTCCTGGGGCTACTAATTACTATTGTCGGTTCTCGCCACGTGCCCGG
CGTCGGGGAAGTGACCAACGAAGACAGAACAAAAAAAGAGATTATACAAATGCTCTGTGT
TAAACCGATGCCACACTCGGAACTCAACAGGTGTCTACCAGAGGATCAACTGCACGAAAC
TGGTCTCGAATCTGTCATCAACGAGGTGGCGGACTTCGTGAAGCCAACGAGCGGCACGAA
CCGCGGTCTCTACAAACTCAAATCGCACTTGTACGATGAATACGACACTTTCTTCTATCA
TTACACAAGAGAAGAACTGTCCAGGAGCGAAGAGGAACAAAGGAACAGAAGGAAGGCTGC
CGGCCTGTCGGAGTGCTGCCCGCCGCCGGTGCTGCCGAAGCTGTCGCCGCCGTTCTCGAT
GCTGGCGCACCTGCTGCAGAGCGACGCGGCGCTGCTCGTGCTGCGGACCGTGCTGCTGCG
GGCCCTCGACCTGCGGGCGCGCGCCTTCTCCGAGACGCAAGTGCACAAGGCGCTCCACTT
AATGGGCTACGCAATTCGAGACGAAGAGAGCGGCCACTACGAATTCTTAGCGTTCGCCGA
AAGTGCGAATCGTTGCGGCCTGGTGGCGCTGCTACAGAAGCTGGTGGCCAGTCCCAGAGT
GGACGCGCACAGACATCTCGCCAAATGGGTGCTCACTAGGATAAAAGCTCTGTTAGGAGA
AACGGACGACCAAGACGAACAGAAAATGGAAACTGATCAAGAAGAGAAACCGAACGCAGC
CGAAGCAGAAGCGGAAAAGGAACGTCGCGCGAAGTTAGCGGCGGAACGTAGAGCTAAGGT
GATGGCGCAGATGAAAACTCAAATGAAAAATTTCATATCCAACAACGCTACATTGTTCGA
GGAAACCAACACCGAGGTAACAGCTGAAGAACAGGACCTTCGGCCTTTGTACTGCGGAGC
TGCTCTCGGAGTGTGGGGGGGCGGAGTCCCGGAACCTCCGCGGGTCTGCATCATGTGCCA
AGAAGAGGCACGCGTCGACGGAACGGGAGAACCGCTAGTATTAGTGGCCTTCGTACAACA
ATCTGGTGTGCTGAGCCGGATCAGAGATGCTGGAGACAACGAGAGGAGTCGGGACGCCTG
GCTGCCTGCTGGCATCAGGCCCCAGCCTCACGTCTCGAGCTGTGGTCATGCGCTCCACGC
TCGCTGCTGTAGGAATTATGTTGATGCTGTACTTGAAAAGGAGAATCGCAGACCGTATCG
CGGCCGCCAGCCTGCTGCCTTCGACGTGGAAAAGAAAGAATATCTGTGTCCGCTGTGCGA
GAGGCTCTGTAACACCGCCCTCCCGCTACTGCCCAGTCCCGCCCTCCCCGGAGGCACCCC
GCCCCCTCTCACCGAGGAAATGTACAACGAGGCCGTCAACCTCATCCTGAAACTAAAACA
CCAAGTGTGCTCCGAGTCGGTCCACGTGTGCACCGAGTTCTGCGAGGAGATGCACTGCCA
GGCGCGGGCCAGGAGCGTGGGCGCCATGTCCTCCGACATGGAGGAGGAGTCCGCTGACGA
AGCCGAGGTCTACGTCTCGACTCACTCGGAGAACTTGCTGTCGCCTGAATTCCTGGTGCA
CTTTGAGGGCGAGGTGCCGCAGTACAATGAGCTTACGAAGACGTTAATCGAAGAATTTGC
TAGTGTTTTACCCGCGTCCGAGTACGGCGGGATGGCGTCCACGGCGGCGCTGTACCGCGC
CACGTCGTACACCGTGCTGAGCACCGACGCGCTGCTGCGGGCCGAGCGCCGCCCGCTGCT
GGTGGAGATCCCGTCCCGCCTGCGCGACGCGCTGCAGG
(2378 bp)

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