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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13997_c0_seq1
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		vacuolar_protein_sorting-associated_protein_53_homolog_[Bombyx_mori]
Ontology
GO:0000938 C GARP complex
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0032456 P endocytic recycling
GO:0042147 P retrograde transport, endosome to Golgi
GO:0055037 C recycling endosome
GO:1990745 C EARP complex
Transcript
Level		FPKM:10.20 TPM:11.00
ORF EntryO_BomoOtmSK11667_complete:A_BomoOtmSK_comp13997_c0_seq1
Sequence
(Nucleotide)
ATCCCTATATTTTTTCTCTATGGTTTTGAATATCATAGACTGCACATAATACTCATTCTT
CTAAATTCTCAAATAGCCGTCGTATTATTACGTTTAGACACGTATGTGATTATTTTTAGA
ATAACATAATTTATTTTATTAATTATTTTAGGTCGTGACGCACAAACCGATTTAAAAAAA
AACTATGCTTAGCCGTTACGTCACTGTGCACATCCGACTAAGGTTCCTGTTTTTTAATTA
GTAGCGTTGGAGTTAACTGTGATCTTGATGCCAGTTAAGGTAGTTGAATCATTGAAAGAC
CACATCGTGAGATACAATTTCGATTTGTAATTGATCATTAATATGTAACACAAACGTCCC
CTGAGATCTTAACAATAAATTATATTTTCATTACATAACAGACTCCCGTAAACTTATTGA
CAAAAACAAGTACAGGCGAACCTCTAGCTGAACCATTCGTGGGGGCCTTATTGGAAAAGT
TGACATTAGCTGAAGCCATCAGCGTGAGGCCTATTTAACATCGGCAGACTTGCAGGCATT
CTTGAAGACAGCATCCAAATTGCTCATCTGAGTTTTAGATAGCTTAGCGCCTTTCATATC
TAAAACCTTGTGGAACTCAGCCAAGGAGCAATCCGGTAGCAATTTGACGAACTGCGTGAC
GAACCCCTCCAGATTCCCCTCGAGGGGGGCCATCACCAATTTGAGAACCATTTCCGCTTT
CGTCATCAACTTGAGGACTACTTTAGTGTAGGTTGCGGGTGCGGCCCTTTTGACCTCCGA
CCCGATTGAGGGTAGTTCTAACAGCGCCGTCTTCAGCATGTGCGTGTCAAGCAACAGCTG
CTCAGAGCCGACCGTGGAGATGGGCTTGCATTTGTACACGTTCTGAATGAATTTCGGTAT
GAAAGAATTAGCGAATCGTATGCAGAACTGCGTGAAGTACTTCCTGGACGACGATAAGTT
GTCCCTCAGGTTCGGCACGGTGTTCTTCAAGTGCATTATTATCTGAGTCACGTAAGAACT
CTGGTCGCCTACGTTGTCGAAGCTCAGCCAGGATATCTTGGTCATGCTCTGGAGGGCCGG
CTCGCAGGCCGTCTCCAGGTCCTGGACCAGCATCTGGATGCAGTTGCTGATGATCTTGTG
GAACAAATCCTGTTCCGGTGTCAAATCGATTTTGTCGGACAGCTTCGGACTGACCTTCTC
CTTGAGTTTCTGCTCCAGATGTATCGTGGTCTCGAGGCAGTACTCCGAGGTCGTGATCAC
GCTTGTTATCTTTGAGATTTCCTGTTTTGTGTATCTGGAAACATTTCCAGCTTCATCTCT
GAGTAGCGTGTGTAAGTTCGTGACTATGCTCGGCACGGTGTTGCCGCTTAGCGACAGCGA
GAGGAGGGACGTCGGGTTGGTCCTGGGCAGGGCAGCTTGCAGCACAGAACTGGCGTACTC
GCGTAGATACTTCTGGAATACTCCCGCTAGTTCCAGCATCGGTTCCCCTGTGGTGAGCCT
GGCGCATTGCACCAAGCATTTCTTGTAGAAGAGGAACAAATCCGCGCAGCTGGATATGAC
GGCTCCTTCTCCACTGGCGGTCATGTTGGCTTCAGAGGGCGACGTCTTTGCATCCTGCAC
GAATCTCTCGATGAGTGAGCTCAGGTTCGAGTCCAGACTGTTGATGTACAACGAGAGATA
GGGCTCGAAGCAGGACCCTATCAGCCCGACCCAACTGCTGGACGAGCCTTCCGCCTGCTG
GCCGTCCGAGTCTGCGGTGTTATCTTTCGTTTCATTATCGAACGGCTGTTTAGAGTTCGT
GTCTACATTGTCAGGCTTCAGGTCTGTACCTGTGAACCTCTTGTGCAGCAGTAACTCAAA
GTTGTAAGTGTTCTGTATCGCGTACAGCAGCAGTTTCACGTCTAATTCGTTTCTCCGCGC
CGCCATTAGATTGCTTAATTCCGTTGAGGTGATCTTACAGAACTGCCGCGCTATGTTCTC
GCTCAGAGCCCACTGGTAAGGAAATATATTTCCGAGGGTGTCTTCGAACGTGAGGAGATG
CTTCTTGAGCCACGCGTACCGTCGCTCGATGTGAGTGAGCCAGGCGCACTCCTGCTCCGA
CGAGTACAGGTGCTGGTATTCCTGTAGTTGCATGTTGATGAACCACTTTAACAGATCCTG
TTTGACCTTCGGGTCCAAGATGTCGACGACGCCGCAAGCTTCCGATAGCGTCCTGTGTGT
TATGTTGCTTTTACTGCCGCCTGTAAAGGCTTGTTTAAAATCAGCTAATATTTGATTGCC
CAAATCGTTCCTTATCGAGTGCACTTGATCCCTTAAGACGCTGAGTTCGCGGATGTCTCG
GTAGCATTCAAAGTGCTGTAACACCTCCATAATAGCCTGCATGGGCAACGCTATTTCCTT
GTACTGACGGTTCTTCGTCATTGTGGTGAGGGTGTCCACACCACCAGCCAGCATGTGCAG
ATGGTTGAGGGCAGTAATAGCAGCGGTCAGATTACACTTAGCGCAGTCCAACTGCTTTAT
CTCGCAAGTTATCTCCCTGACCATGCTTTCGCTTCTTTCAGCTTTCTTGTTTATATCCGC
GACCTGCAAAGCTAACTCTGCTATACATCTCTGAGCTTCAGTAAGTGCTTCCTGTCCAGC
TTCCCTCTGTTCAGCCTGTGCTCGGACCAGTCTTCTAATATCTTGTTCCACTCCTGAAAG
TCTAAATTCACAGCGAGCCACAGCACTTTCCACTCCAGAAAGAGATTGCTCAGTTGGGAA
CACTCTGTTGATGTACGCCACTGCATCAAAGTCATCGCTATCGAACTGTTCCGTTCCTCC
CATTAATTCCTCTATGCGGCTCATTACGGAACTCGGAAAGTTAATTTGAACTTCTGGCCC
GCTGTCTTTATCATCCGTAGCATCATTCGAATCCATTTTAACGTAAATTTTAATAAAACA
TTGAAGAAAAACAATAACTCCACTAATGTTTCACTTCATTGATGTCAT
(2988 bp)

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