SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13978_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		host_cell_factor_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000123 C histone acetyltransferase complex
GO:0003682 F chromatin binding
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0016568 P chromatin organization
GO:0043025 C neuronal cell body
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0045931 P positive regulation of mitotic cell cycle
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
GO:0048188 C Set1C/COMPASS complex
GO:0050821 P protein stabilization
GO:0071339 C MLL1 complex
Transcript
Level		FPKM:5.97 TPM:6.44
ORF EntryO_BomoOtmSK11622_complete:A_BomoOtmSK_comp13978_c0_seq1
Sequence
(Nucleotide)
TGTAATTAATAATTAAAAGCCAAATTACATTTTATAGTTTTTCTTTCCATTAAACGAACC
TTAAGCTTATTGCCACGATCACTGTATCACTGTATCATTAATACGGTCCAATGTCTCAAT
AACACTTATTGTACTTCATACCACTTCCCAAAACGTGACAACAAAACTATGTTGTGACAA
CGTCAGTGAAGCACGGTGGTAATTTTATGGTTTTAATTACAATTATCATTATTGCGCTTC
TGCTCTCTATTTAGAACAAAATTAACATATTACATTAACGCACACACACGGATATGTAAA
AAACAATTTCATTATTTTCCTTCCTAAGTCAGTCGTCTCCTCATTAAGTCTATAATTTTA
GGCACAGCTTCTTAAGTTTAATGTGTCGCGTTTAAAAAAATATAACGCAACATATAATGT
ATTTAAAAATGAATGAAAAAAAATCCCCCGGAAACGTTTTAATATTTCCATTTAGAATTT
TATTATATATGTATAGATATTGAGATTTCATTTCACTGAATGTTACAAGACGAATCGTCG
ATCAGAATGTTCAACTAACACTACGATGTAACGAATACTTCTTATGAACTTATTTATTAA
AATTTGCGGGTAGTCTTAATCAATCAAAAATAAAAATTAATGTACTATTTGTTTAGGTTG
CTTTGATGGGGACGCTCCCGGTAACCTTCCCTCTCCTGCTCTTTTCACACCAGTGGATTT
AATATCTTGCAGCCACCTGACTTGCGTGGCGGGGCCGTAGCCCTTCTCGTTGCGCGCGGC
GATGCGGAAGATGATGGCGGGCTTGGTGGAGGAGTCCACGTGCGCCGCGCTCAGCGACGA
CTGCGGCACCACGCACGTGTTCGCCTTGCCGCAGTACACGCGCACGAACGCCAGCTGCGA
CTTCGCCGCTTCCTTTGGCTGAGTGTTGGAGCGCACCGCCAGGTAGACCGAATATTCGAA
AATCCCTTCGGCAGCAACTTGCGGTGGCTCCCAGGACAAATGTGCGCCCTCTACTGATTT
TGATATTTTGATAGCTGATGGCGCACCGGGGAATCCCGGCAGACAGGTTTTGAATGCAGA
CTCTTCGCTGAACTCTCCTCGGCCGCAAGAATTAACAGCAGCAATTCTGAACTTATAGGC
TGTGCCATGTTCTAGGGGCGTCGTCGGCAGCCCGGTCAAATCGGGAAGACTGTCTAAAGA
TAAATTAGACAAGTCTATGTTTGGATCCGATATATAATTTTGAACCGTAAACGTAGTTCC
TTTGACGATGCCGACCGTGTACCAAGCGTCCTCGTCGTGTTTCTTGGGCTCTTCTGGTTC
GGCCTGTTCGTGATGGTGAAGAGCAGCACTGGCGAGTGTGGCAAGAGCGTGCGCAGCGAT
GGTGGAGGGGAGGGTGCTGCTCACGGCTCCTTCCGCCTCGCCGCTCGCCGCGGACGCCGC
GCCGACATCACTTGCCGCATCTGCCGCACATGCCGCACCCACCGATGACGACACCGACGT
AGCCCCGCCCTCCTCACCTTGGATCGGAGTAGACGTCGGCGTCGAGGTCGGCGAGATGAG
TGCGGCGGATCCGTTGGCCGTCATGGTGAGAAGCGGCATGGACGACTCGCTGCCCGCGGG
TGCCGTGTCGGCGGCGCCTTCCATCTCCGAGGTATCAGCGTCGCCGAACCTGCTCGATAG
AAATTTGAGATATTCGTTTGTGGTCTGCTGTTGAGGAGTGAGCGAAAACGAATGTACTAT
GCCTGGACCATTGGCTGTGGATGATATTAATGACGGCTCTGTTTGGCCGCTGCTTGAAAT
GTCTGATCCAGGTTCTGCAGTGCTCGAGCTTATTCCAGTGCTGAGTATCTCCTGTGCGGC
ACTACTAATGTCGTTGACATCATCACTGCTGGCAACCCCTCCTTCAGCTATATCTTCATC
CATTGTACTTGATTCATCATCTTGAACGCTTGGTGCTCCTTCAACTTCACCTACACCACT
ATCTGTTGGTAGAATGGCAGAACTGATAGACTGATCAGGAGACTCTTCAGCATCACCTAG
ACCCTCTGCTTCTTCTGACTCTGGCTCCTTTATCATAGAATCTAGTTGATTGTCTTGATC
ATTTTGGGGCGAATTCTCTTCAGTATCTGCAGGTGTAGAAAGACAATTATCTCCGATATA
CGCTGATTCCTCGTTCATAGCACCTGAAGCAGTTTCATCTATGTCCATTTCATCTTCAGC
ATCTGCATTACCTTGTTCAACTACAGGATGCTCTTCCTGAGCAGGAGGTGCAATAGAAGG
CTCTACGTCCAAAACATCGCTGCTGCTAGTTGGACCACCATTCGCAGCAAGTTCCTCAGG
CTCAGTGGTCACATCGTCACTTGCTGAATTATTGTCAGGCAAATCATCGATAGTATCGGC
AACCTGGTTATCCTGGTTATCGGCTTGAGGCGACACTTCCGCGCCATCGTGAGAATCGCT
GTGAGTGGCAGGGTCCGATTCCATTTTCGTGATCTAACAGCGTGCAAACTGCACAGATTG
TATATTTATTGATATTTAAACAACAATTGAAGAAAAACAATGAACATTTTCAGAAATATA
TCAGAAAACCTGTATAGTTTTGACACATCGCCTTTTTTCACCGAG
(2625 bp)

- SilkBase 1999-2023 -