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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13974_c0_seq3
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		RE1-silencing_transcription_factor_isoform_X4_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0019827 P stem cell population maintenance
GO:0021915 P neural tube development
GO:0035115 P embryonic forelimb morphogenesis
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.29 TPM:0.31
ORF EntryO_BomoOtmSK11611_complete:A_BomoOtmSK_comp13974_c0_seq3
Sequence
(Nucleotide)
TTATAGGTTAGAGAAAAATTAAACTCAATTCTGTTACAATTCAATCAAATGTGTAAATAA
AGTTTGTGAAAATGGACTCAAGAAAAGAATCTTTAAGTACTTTAAAAATTTGTAGGTTTT
GTCTTTCTCAAGATGAAACACTACTTACAAATTTGTACGAAAAAAATCGAGCGCCAAAAA
ATGCTATAACTCTACAACTTAAAATTTTGTCCTGTGTTGCGATTGAGGTTTTCCCTTCGG
ATAAAATGCCTCCATACATATGCACTCGCTGCAAGTTTTTCATGGACCTCAACTTTGAGT
TCAAGAGAATCTGTCGGTCAGCTGATGAAAATATACTGCAGTTTATTCAGAATGGAACAA
CATTAGAATCCTTAAATTGGCCACCCTCATTGAAAAAGATTTTCCAATTGAAAAGTAAAG
GTAAAGTTCCAGCTGAAGTTCCTGTCATGAAAACTGTAATAGAAGGCGGTGCTACAGTAC
AGGTCTCAACTCAAGATCTCTCGGACACCGATATGGAGGATGACGAGAATGTCTACAATA
TAAAGATAGGTGACGGTCCTGATGATGAAAGCAACAGTGCCCGGATTAAAGTGATCACCA
CTGACAATTCTAAAGAAAAAACTAAATCTTCTAACAAAGGTTATTCGTCAATAACTAAAT
TGACGAGGCACGTGCGGACCCATGCCGGTCAGAGGTCGTATCCTTGCAAATTCTGCAACA
AGAGCTTTGTAAAATCGCACCATTATACTAGACACCTGCGCGCGAAGCACGCGTCGCAGA
GCGCGAGCCGCGCCGAGCCCGAGGAGCAGTTCCGCTGCGAGCAGTGCGACGACGCGTTCT
CGACGCAGGACGACCTCATCTACCACTCCGCCATACACGCCACGCAGAACCTCATCTGTC
CGCTCTGCCAGGAGAAGTTCGACGACGTCGACGCCGTCACTGCGCACATCAAGTCGCACG
TCAACGGATTAGAATTCATGTGTGACTATTGTGAATTAATATTCACCGAAAGAGAAAAAC
TTGATAACCACGTGGCAACGGTGCACGATGAAGAAATCATTAGTGAGGTTGGGCAAGACG
ATTCTTCAATTGAAATGGACGCAGAAGATGCAGAAGAAGAAGAAGACGATGACAACCCTA
TAAATTTGACCGAGGAGAACGGTGAAATGGTCGTGGAAATTAAGAAAGCTGAGAATTTTA
TGCTTGATACCTTCAAAGGTGAGGCCGATCCGGGAGTCACAGTGGACAACACAGAACACA
ATTCTGAAGACATGTCCAGAGTGGATCCTGTAACTGGTCCTATTAAAGATGAATTGTCTG
AGAAGCAACCCAGCCCGCCTTCCGCGGAGCCAGTCACATTGAAGCTAAACGAGCAATCTA
CTGAAAAATGTGAAAGCCAAACGGCGAGAATACTTCGCAAGGCGGAAGAAGTAAAGAGAA
AAACACAGTCAAAGATAGACGCTCCTCAAGAAAAGAAGGATAAACCAAATAACAATAACA
AAGTTGAAAGCAGTACGCCCGTAGGCGCCAGTGACAAATCACTACGATTGCTGGAAAAGG
AATTACAAGATCTTAAACGGACAAACACGAGATCAGAACCATTTAAAACATCAACGAAAT
CCTTAGAATCTTTAAGAAGTAGACGACCGCAAATTCACACTTCAACTCCAAAAACGAGAC
TGACTGATGAAAAGAAGCCTCAACTGGTGCAATCTAAATTGACTCTGATCGATAAGAAAA
TCCAAGAGAAACGAGCTTTGACAAAAGAAAACAAAGAACCAAAGGAAGCCAAGGATACAA
AAAATAACTCGAATGCTAAAGACGAGAAGGAAGTAAAAGAGGTGATTAAAGATAAGGCTG
GATCTAAAAATGGCACAAGTGAAAAACGTGAAGACGGACCCGTCCGACGATCAGCTCGAC
CTTCTAAAATCAGGGACTACGCTAAAATGATCCGAGATAATTCTCAAAATTCAGACTTTT
CTAATGAAGATTCTGACAATGATGATTCCGATGATAACGAGTTCAAGGAAACTGAGATAC
CTCCCGAGACCCGTATGAAGCAACGAAGAGCCAGTGTCAAGCCAGTGGTAGTCGCAAAAC
AAGCTCAAACCTCTTCTGAACCGACACCCACGCCGCCCAGGAAAAGGGGAAGACCACGTA
AAGACTCAAAATTGCCCCCTAAAATCAAGAAGGAAGATAAAGCAGAAACCAAAATTGAAC
AAGTAAATTTGGAAAAATCTCAAAAAGATAGTGATAGCAGCAAACTTGATAAAGTAACAT
CAGAAAAAGACGATGGAAGCAAATCTGACCTAACGGACAGTGAATCAGGCAAGCCGAACA
CTGATCAAAACGCACCGGGTGGAGTTTTGGTCTCTCCTACGACAGGACAAACACTAAAGA
AGGTACCAATCAAGGCACTTCCGCCAGGAGTAAAGCCATTACCTCTACTGGCAAACACGA
GATTGGGTAGCGGCGAAGTCTGTGAAATGCAAATAGGAAAGAAGTTAGTCAAAGTACAGA
AGATAGTTATGACCAAAGCAGAAGTGGAAGCCATGGCCAAGAAGGGGCTCGTCGAAATGA
AGGACGGCACGATGGTTTTGAAGCAAGGAATAAAAATACCAACTGCAGATAACAATACGT
TAAAATCTACATCAATCGGAGAAGGTTACGAGGCGAGCAAAGAATCTCCTAAAAAAGAAA
GGGGTGCACCCACGAGATGTGACATAGGCGACGATTCCTTGAAATAATTTAAAAACATCG
CCTGATTTAAATGAAATTTAGAATATTTTTACTAAATATCTATTCAAACATTGTGTAAAG
AGACCGTTCTCGAAGCGAATTAATCGCATAAAGATATTCATTTACTAAACCAAGCTTAGA
TACTTTTTCATGAACTAGATTATGCTTTTCAATTTTAATTGTGAATAATGCAAAGACTTA
GTACATATATAAAATTTCGAATGTTTTTTACTATCATGTTTGGTATTCTATCAAGATTGT
CGCCTGTAATTTTTGTCGAGAGCCTGATTCTGAATCACCCCGCGTTGCATCTTAATTTTG
GCACTTATAAAGTCATATTATCATGAATTGTTATTTACATGAAATCTTGATTTACCAATA
CTTTTATTATTTGTTTCTATAAAAAAAAAATAGGATTTAATTAAAACATAGGAACACACA
AGATATCTTTTGCACGTAATTAAGTCATACATTATGTATTTTGTGTATGTATGTGTGGGA
TGCACTAAAAAGAAAAATGTATTCATTCATCTTAGCCTGT
(3280 bp)

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