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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13964_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		ubiquitin-protein_ligase_E3C_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0000502 C proteasome complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:2.33 TPM:2.52
ORF EntryO_BomoOtmSK11582_5prime_partial:A_BomoOtmSK_comp13964_c0_seq1
Sequence
(Nucleotide)
GGGCGCCATCCCCGAGGGGGGCGGGGCCGCGCTCGTCACGCACGCTGTGCACTCGCGACC
CTTCCCCACGCATCTGCGGCAGCTGAACCTCTCGCAAGAAGAGGGCCCGCCGCTGACAAT
CAAGGAGCTGAGAACAGTCACGATACTCAAAGAAATACCATTCGTGGTGCCGTTCTCAAC
GCGAGTCCTGATATTCCAAGCGCTACTCGCAAAAGAAAAACACGACAATTGGTATGAGAT
GACTAATTTCAGTGAAGGTCCGTTTATAAACATTAGCGTCCGACGCACGCATTTGTATGA
AGACGCGTTCGACAAACTCAGTCCCGATAATGAACCAAATATGAAATTAAAGTTACGAGT
ACAACTGATCAATCAAGCCGGCGCCGAAGAGGCTGGCGTCGACGGTGGAGGCCTATTCCG
AGAATTCATATCTGAATTACTTAAATCAGCGTTTGATCCAAACAGAGGGTTGTTTCGTTT
AACGAAAGATAATATGCTGTACCCGAATCCTGGCGTTAACTTGTTGTACGATGATTTTCC
CATGCACTATTACTTCGTCGGCAGGATGCTTGGAAAGGCACTGTACGAAAATTTACTGGT
AGAACTTCCACTAGCGGAGTTTTTCCTCGCCAAGCTGTGCTCGTCTCGGGAGCCGGACGT
TCACGCCTTAGCCTCTTTGGATCCAGGCTTGTACCGGGGGCTATTGATGCTGAAGTCTCA
TCGAAGGCAAGACGTTCCGGATCTAGGACTCGACTTTACGATACTCAGCGATGAACTGGG
CGAGCAAAGGATAGATGAACTGAAACCCGGCGGTGCCAACATTCCAGTGACCGCTGAAAA
TAGGATAGAATATATTCATCTAGTCGCCGATTATAAATTGAACAGACAAATAAGGTCTCA
GTGCATCGCGTTCAAGCGCGGGCTGGCGTCGGTCGTGAACGCGGACTGGCTGCGGATGTT
CTCGTGCCGGGAGCTGCAGCTGCTGGTGTCGGGCGCGGAGGTGCCCATCGACGTGCGCGA
CCTCCGACAACACACGCTTTACTCCGGAGGCTTTTCGGACTCGCATCCCACCGTGCAGTG
CTTCTGGAAGGTGGTTGAGAACCTCACGGATGACCAGAGACGACAGCTGCTGAAATTCGT
CACGAGCTGTTCGCGGCCCCCCTTGTTGGGTTTTAAGGACCTGCAGCCGCCGTTCTGCAT
ACAGTCTGCGGGTGCGTCGGACCGACTCCCGTCGTCGTCCACCTGCATGAACCTGCTGAA
GCTGCCGGAGTTCCACAGCGAGGAGCAGCTCGCGGAGAAGTTACTGTACGCGATACAGGC
CGGGGCCGGCTTCGAGCTTAGCTAAAAATACAATACCGGCGTTGGAACAATACCTATTTA
TTTAGTGCATTAAACTTGTAAATGAAGTTGACAGTTTTTTTTTTCACTAATTAACAATAC
GAAATGTACCTCGATGTGATATTGTGTATATTATTGACCGCGGTGATTCTCTTCATTTTT
ATGGACGGGTGAAAATCTAATGGATATCTTTACGTGTTGTATACAAGTTTATTTAGTGAA
TTACTATTGTACACAAGAAACTAGGTAACAGATCGTCGAATGATTAGTTTTGATTTTGTT
TGGCAATGTTTGGCAATGGATAGACGGGCTGAAGAATTTTAATATTCTAACGCTGTACTT
GAAACTGTGGAACTTGCTAAGTTTGCAAATCTGTTTATATACAGGGTGTGTGCCGTTACA
GAAAATGAAAACAGAGGAAGTTGTTTTAGACGCGATAGTACTAAGAAAAGTTTTTGTACG
ATCTTTATACACCCTGTATGCACACTACACACGAGAGATCGCAGATTCTAAACTGGACGA
CTTTTTGTTATGTTACCTCTTCGTTTATCACAGATAATAGTTTGTTGGCAACGTTTTTAA
CACAACTAGTGTTCGTCCAGTGCTGGAAATTTGACAAAAATCACTAAGTAACACATCTCG
AGGTGTTACTTATGAAGAAAAAAAGTGGATGTGTTTTCTTAGAGGGCAATGTTATGTAAT
AAAAATAACTTTCCTCACTAATGCTATGTTTTTCAAACTTTTATTTCCTCTTTTCGACGC
TAAATAATATCTTTTTGTCATAATAATAGTTTAAAATTGAGAAACACAAGAAAAATACTA
ATAAAAAAATGTGGGTAGTTTTTTATTTTTCTAAACATTAATTATACCATCAAAATCTGA
CTTCAGTTCACATTTTTCCCTTTGTTACATGTGTTAAAATGTATCAAAAACCGCGCGCAC
CGTAAACCTACCG
(2293 bp)

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