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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13956_c0_seq1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101737934_isoform_X1_[Bombyx_mori]
Ontology
GO:0005328 F neurotransmitter:sodium symporter activity
GO:0005332 F gamma-aminobutyric acid:sodium symporter activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0007612 P learning
GO:0009636 P response to toxic substance
GO:0009744 P response to sucrose
GO:0009986 C cell surface
GO:0010033 P response to organic substance
GO:0010243 P response to organonitrogen compound
GO:0010288 P response to lead ion
GO:0014054 P positive regulation of gamma-aminobutyric acid secretion
GO:0014070 P response to organic cyclic compound
GO:0014074 P response to purine-containing compound
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0032229 P negative regulation of synaptic transmission, GABAergic
GO:0032355 P response to estradiol
GO:0042220 P response to cocaine
GO:0043005 C neuron projection
GO:0046872 F metal ion binding
GO:0051260 P protein homooligomerization
GO:0051592 P response to calcium ion
GO:0051939 P gamma-aminobutyric acid import
GO:0055085 P transmembrane transport
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
Transcript
Level		FPKM:6.41 TPM:6.92
ORF EntryO_BomoOtmSK11558_3prime_partial:A_BomoOtmSK_comp13956_c0_seq1
Sequence
(Nucleotide)
GCTTCGTAGTGTAGTGTTTTGTACCTATAATTCTCAATAAGTTCGTGTTGAGTTAATTAG
TGCTATAGTTGAAAAAACATCACAATTATAAATAACATAACTAGAATAGTTAAATTATTT
CAAAATTTGAGTTATGTCTGAGTTTAATATGGAAATATAATAACGATTATAACGCAAGAC
ACGAGACAGCTGACAGTTCGATGGCTGATACACACAAAAGTTAGGCAACCCAGGGCTTTC
ATCGCAACGCAGCGGCTATGACTTAGGCCATGCGATAAAAATGGAAGTTGTTAACACAGA
TGAAGGGCGCTATGAACAAACTGAAAATTTACCAGGGAACAGTGCGGCCGATAGCGACGC
TTCGAGTAGTGTTTTTGAAGGCAACGATAGCGATCGGTGTAGTGAGGACTTTGACAGGAT
ATCAGATGACGGCGATCTAAGGGAAGACCTGCAGAAATCTATCGCAGAATGCTACAGATC
CGACTCGAATTTTTCATCTCAAGCAACAAGCGACATCACAAACGACGAAGAATTTCAGGC
GACTGCGCTCGTCCAGTTCATGGATATACTGAATGACCTGGACGAAGTTCTAGACAAGTC
TCTCTTGGCATGCTTAGATGACGACACAGCAAACTACGACAGCGACGAAAACGATCTTAT
TTGTAAAATTAAAGAATGTATCGGGGATACTCAAGATCAGTCGGAACATTCCGAAGCATT
AAGTTCAATGGACGAAAATACTCAAGTAATTACTTGTACAAACTACGCACCCTCAGTACC
TTCGATAGAAGATTTAGATATAACGCAAGGTGTATCGCAACGACCGCAAACTACAGGCTT
GGGGAGATCGAAAAGTCACTCAGATGTGTCAGCCCGTGATGTCGTTTCAAGCACGGAGAG
AGCCAGCACTACAAATGACAATGTGCGTAATTCAATGAGGAGATTAGATCCGATTGTTTT
ACCGGCGATAACAACAGAACAGCCTTTGACGTTGCCGGTTATATTGTTCTTGGAACATAA
TGTTAATATGCGCCCGACAAGCGTACCGATACAGCTTCAGGTGACGGCTGCTAATCTGAG
CACTGACGGAGCATCAGGACCGCTGATCGTCGGACGGCGTACTCTACTCATGAATCGGGC
CCTCTCGTTGCCTTCTCCGGGCGACAGTGAAGCCGCAGCCGGAGAGTGGACGGGTCGAAA
CACTGCCAGGAGTACAGCAAGAAGCAGCACCACATCGAGCTCGTCAAACGAATCGTTAAA
TGTTGCTGTGGTCAATCAAAGTGCCAACAATGGTACGGAGGAGAGAAACGAAGAGACTGA
AGAACCTCCTTTTGGAGTTTGGCCTCATCGTATGAGTTCGATGTTGGCCTGTTTGAGTTG
TACTGTTGGTATTTTCAACATTTCTAGATTTGCCATATTCAGCGTTCATTTTGGAGCGAG
TTTTATAATACAGTTTTTAATACTGTCTCTGTTTGTTGGAATACCCCTTTTTACACTTTA
CTTATGTTTGGGTCAAGTATTGGAAGCTGGGCCAGTGGATATGTGGAGGATTTCGCCAAT
ATTCCAAGGTGTTGGTATATCATTGCTCATCACCCAAGCCGTAATTGGAATGTACAGCAT
AATTGGTCTTTCTTGGATATTCGTGTACTTTCGAGATTCATTCATTAATTCTAACGACAA
ATACAAGTGGGCGCTGCCGCATGAATTCAATATCGAAGATCCAGCGAGCCGAAACGGTAC
ATACAAAATTCACGAGACGATACCACAATATTTTCACGGCGAGGTCCTACAAAGAAATCT
GCTTTCTAACGGCAACACGTATTTCGGAACGATTAAGTTTCAAGTTGCGTTCAATTTGGC
CGTGGTGTGGATGATCGTTTTCGTCGCGCTGAGCAAAGGACTGCGATCGTACGGCAAGGC
CGTTTACATATTAATATTTCTCCCGATATGCGGAACCCTTGTGCTGTGCACGAAACTGTT
GACGCTGATACCGTATGACACCGTCACGAATATATTCGCCGAGACCGAATGGACGGAGTT
CTTCGTGAACAGTAACAGTTGGGCGGCGGCGGCACAGGAGACATTCCTAACTTGGGGCTT
GCTAGGGGCCTGCGTGATGCAACTGACGTCCCACAAGAACGCAAAGAACAAAACCAGTGG
TATGCTGCAGAGGGAGAGCGCCTGCATCATAGCATTCACTTTCGCGGTTTTGTTGCTCGG
CTCGTTTTTAGCTAACACCTGCGTACAGATACTGAAGAACTATGGATACGTTTACATACC
CGGCAGCTTTGAAACAGTCAAATCATCACAATTCCTGTGGCCGAAATCGGAGCCACTGCC
TGGAAATTCTGCCTCGACTCCTTTGCGTTATATGGGACATTACGGCAGTATCGTCGGTGT
TACGGTTTGGCGTACTGGCAATGCGGCTCGAATATACAGCGGATGGCAGCCTCTGCAACT
GGCCACACAGCTAGTGCCGGCCACTTTGGCAGTATTGCCAGCTAATTTGCTCTCACCTGC
CTGGGCCGTGATATTCTACTTCATCATAATAATGTTCGGAGTAGCGCAGCAGATCGCGAT
CTGGCACTGCGTCATTGCCGGTGTGATGGCTATCAACGCGAAGACGCTTCGCATCTGGGA
GACTACGATAACGTTCCTCAGCTGCGTCGTGGGACTGGCCGTTGGACTTGTACTAAGCAC
TGATGCGGGTATAGCGGTGGTGCAGTTCTGGGACTACGTGTGGGCGGGGTCGTGGTGGTC
GTGCGCGGTGCAGGTGGTGGCGGCGTGCGGGGTGTTCGTGGTGCGCGGGCGGCCCTACTC
CGCCG
(2825 bp)

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