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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13955_c1_seq3
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
Ontology
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:4.64 TPM:5.01
ORF EntryO_BomoOtmSK11557_3prime_partial:A_BomoOtmSK_comp13955_c1_seq3
Sequence
(Nucleotide)
AAAATGGCGGACGCCGGATCTTGAATGTTTGTACTTAAAAGTTCAAGAGAATAAGTTCTG
TTGCTTACAATATATAGTGCATATTAAATAGTTTAAGTAATACCGTATTTAAATTCGATC
AATACAAACCATCTAGTTGATTATGAATGTGTCAAAATAGTCGGGATCTTTATATTGTTT
AGTTGTAAACTTTCTTGATTCAGCTTGCATGTAACACGTGAACGGCTATGTTTTGTAACA
TCCATTCTACATTTTCTTTGCTTTTTTTTCATTTTGGAAATGTCTGTGCACTATAAATTC
AAAAGTGCATTGGATTATGACACGGTTACATTCGACGGTCTTCACATATCTGTAGGTGAC
CTGAAAGCTGCAATATCTCAGCAAAAACGCATTGGCAAAACTTCGGACTTTGATTTAGAA
ATCACTAATGCTCAAACCAAAGAGATATATGTTGATGACAATGCTTTGATTCCAAAGAAT
ACATCTCTCCTGGTTGCCAGAGTTCCACTTTCTCAACAACCAAAGAAGCAGTGGGAAGGC
TCAAATAGTAATTCAGCTCCACATAAAGATGTTACTGTTAATAAAGGACTGGCTGATCTA
TCTCGCATGGAAGGTAGCGAACAGGATAAAATAAATGCTATGATATCACAATCAACATTT
GACTACGACCCTAGCAATTATCAGAAAATAAGAGGACAAAATCAGAGAGGGGCAGTGCCA
TCTAATTACATTTGTTATAAGTGTCAAAAGCGAGGACACTGGATAAAAGATTGTCCTGCT
GCAAACTCAGGCGAGCCAGTGGAAATACGACGGAGTACAGGTATTCCTCGTAGTTTTATG
GTACCTGTTGAAGGACCAAAGGCACCGGGCGCCATGATGACTCCGAGTGGAACCTTTGCA
GTGCCTGCCGTAGATCATGAGGCTTATATGGCCTCTGAGAACTGTGCTGGTGATCCATCT
GGTAGCGCACCCAGCGCTCCCGAACCAACCATACCGGATGAACTAATTTGTAGTCTGTGT
CGCGATCTTCTCACCGACGCTGTAATGATACCGTGCTGTGGAAACTCTTTTTGTGATGAA
TGCATAAGAGGTGCGTTACTGGAATCTGAGGATCATGAATGTCCCGACTGTCGGGAAAAA
GAAATATCTCCAACAACACTTATTCCAAACAGATTCTTGAGGAACTCTGTGTCGTCTTTT
CGCAATCAAACTGGATACAGCCGGCGAGCACCTCATAGACCCTCGGTCACGCCAGCTCAA
GCCCGTGCTCCGATAAAAGAGGCAACCACTGCATCGAGTGTACAACAACCTCCACCGAAT
GGACCCGTTAAACCGCAAGTCACAGCCTCTGTCGGCCATCAACCGATGATAAAACCAGTC
GTCGAAAATCCAAATTCATCCATACCACTCAATTTACCTAGAATTGAAGAACAAAGGGCT
AGCACTCCAACAATAGATGAACGAAGAGAACCAATGGAACGAAGAGATCCAATGTCTTCT
CAGATACCGTACAATCGAGGTCCTCACCCGTTCGCTCATGGAGCATCGC
(1549 bp)

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