SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13951_c0_seq1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		nuclear_transcription_factor_Y_subunit_alpha_isoform_X2_[Bombyx_mori]
Ontology
GO:0001046 F core promoter sequence-specific DNA binding
GO:0001221 F transcription coregulator binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0016602 C CCAAT-binding factor complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
Transcript
Level		FPKM:8.51 TPM:9.18
ORF EntryO_BomoOtmSK11544_complete:A_BomoOtmSK_comp13951_c0_seq1
Sequence
(Nucleotide)
GAAGCCCGCTTGTTTGGGAGTGGTAATACTTCGAACCAATCTACTGCGTCCCCCAGATCA
TTGACATCGGCCATTGGTCTATCTATTGTCAACCAATCATTGAAAAACCAGTGAGGGTCC
AATTATTCAACAACGATGGAGCATGCACAAATCCAGAATGCAGATGGGCCCCAAGTGATG
ACCATCAATGGACAACAGTTGCAAGTATTGCAGATGAACACCTCTCCGCACATGGTTCAA
GGTCCTAATGGTCAACAGATCATGGTTCATACAATAGCAACTCCTACACAGACTATTCAG
GTAGCAGCACCGAATGGACAGCAGATCCAACAACTTCAAGTCTTACCGATTTCAAATTTG
CAAGGTGGAGGGAACAATGTACAGCCAATGCAGTTAGTTCAGACACCTGACGGCCAGACA
TTTCTGTACCAACCGACTGCACAGGCTCAACCATCCATTGACCAACACCAAATAATTCAT
CAACCTGCTGTTATCAACTTGAATGGGAATCTTGTGCAAGTTGCTGGAGTGAGTAACGCC
GTGCAGCCACAGCAGATCGTCAATCAACCTAATATCGTCATGATGGTGAATGGCACTAAT
AACACAAGCACAACAGCAACTCCAACAGAAGGTCCGGGATCATCAGCCGCTGGCTCTGAT
GAAGAGCCTCTGTTGTATGTAAATGCTAGACAGTTCAAGCAAATATTAAAACGTAGAGCT
GCAAGAGCGAGGCTTCATGAATTAGGAAAAATACCTAAAGAACGGCCGAAATACCTGCAC
GAATCGCGACACAGGCACGCGATGAACAGAATCAGAGGTGAAGGTGGAAGGTTTCACTCG
GGGAGTAGGAAAAATATGGACAATTCAGACCAGTCACATCTTTCAGAAGATCAGAAAGAT
GATATTAAACCGGACACTGTCTCCATCACAATCATACAGGAAGATGAAACTCCAGAACAA
CAGCAGACGCAGTGGAGACGGCTGGCGCCGCCCCAGCCGCTACAGTCCACATAGCACATA
GCCATTGAATACTTGAAGACTGAGTGATGTGATGACTGAACGGATAACACTCAAGTGCCT
CCATCGATACCTATTTGTATGCTGTGGGTGGTTTGAAAAACATTGCACAGAAATGTGGTG
AACAAATCGTTTTTTAATTACATTAAGTTTTGTGTTAACATTTACTATTTAAAATTATTT
TTTTATAGTAAATACTATTTAATCATTTTTAATATTGTGTCATGTGGTTCCATAAAATAC
AGTACCTACTAAGAATTCCTGTACAAAATAGTCAGTGTTTAGTTTTAAATGTAATAACAG
TAAAGTCTTAAATTACACGTTGTGTACAATAAAGACTATTAATTTAGTTTAATAGAATAG
AAATCTATTTTGTGGCCTTACTTTTTTTATAAACAATAATTTATGTTAAGGTGTATTGTT
GAAAAACAAGAGGCACTAAAAGTTGTTTTTTTTTTTGTGTTTACTTCTGTTTTAGTTTAT
TTGAATTAGATCGTGCTAGATGTATTGTGCTATTATAAGTTTAGCTGTAAGGAAGGGGTT
TAAATCGTGAAATTGAGCGATTCAGCATATCAATCATTCGGAATGCTAAGAAAAATGTTA
TTTTAAAAAAACAAACACAAAAGCTGTTTTTGTGTCAGCTGATTTCACAATTTATGCAAT
ATAATTATACGTTTACTTCATAGCTGTTATTCGTTTTGTAATCGTAGATACATATTGTAC
GTGGAAGCCAAAGAATGTGTGGGAATGGATAATGTGTTTCACTCGGATAAGTTGCAAGCT
TGCAACTACTATACGGACTTTGAACAAAGACACATTTATTTGTCTTTATGAGATTGACTG
TTGTTGGATATTATACGTTTTATTGATGCGAATAAATTCAGACTGCTCTGTTTTTTAATA
CATTTTGAGCAGTTCATATATTATTATGTGGTCAAAGGTCCGTGTACCTATTTATTAAAA
ACAACTAAGATATATAACTGTTGATAAAAACCATGAAAGTGGATTTGTAAAATAAATTAA
AGATTCACCAATATTCTTGTTATGGACGTTGCTTATGACCCAAGTTTTTTTATTTTTTTT
ATTTCTTAGATGGGTGGACGAGCTCACA
(2128 bp)

- SilkBase 1999-2023 -