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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13924_c2_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101740268_isoform_X4_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0002218 P activation of innate immune response
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032481 P positive regulation of type I interferon production
GO:0035438 F cyclic-di-GMP binding
GO:0061507 F 2',3'-cyclic GMP-AMP binding
Transcript
Level		FPKM:0.39 TPM:0.42
ORF EntryO_BomoOtmSK11476_complete:A_BomoOtmSK_comp13924_c2_seq1
Sequence
(Nucleotide)
CACATAATGTATTTGTACCGTACGGTATGTAAAACTTTTAATAATTTTTTATTTGTACAT
TGTACATAATTAAAGCTTCATCTGCATTGAAATGATTAATAGATGTAAACAAAATTTGAA
GCGAAGATAAAATCTGTCATCGATAATGGCAGGCTTAAATGAGACTCATATAACATTGTT
GAGGGTGCTGTTTGTCTTGGGTATCACAATAGGCTCACAGAATATAGACATGAATCAGGA
TTGGCTGGCTAATATTGCTCGCTACATCGTTTACTTCATATTGGTTCGCGTGTCGAGGCC
CGCCGCCGTAATGGCGTACGACGCGCTGCACAACAATGCGGTTCTAGATTTTTCTAGACT
CGTCGAGAAGCAACGGAACACGATCGTTTTGTTCGTCGTTTCCTCACTGGTCCTGTACTA
TTCGAAATTGAAATTATTCGGGGAGGATTTCGTGTCGCTGTTCGTAGCCTATCTCCTGTT
GCACCGCGACGAAAATAACCGGAAGCCGTCAACCGTCACTTATGGAGTGGGGATGGCCTG
CAGCTACTTCGAAGGATACTTGAACCACGTGATACCCTCGGACGGCTACAGATTCGTAGG
TTTTCAGAGCCTACCAAGGATCACGAAGGACGTGGCCGGCGTCAAGAATAGGGAGTACAA
GAACTCTGCGTACATGATACGGAGGCCGGACGGACCGCCGGTATACCTGGCCGTGGAATG
CGCCACGCCCATACACACTCTGTACAACGTCGTGAAAAACCGGCAGCTCTATTCAGAAAT
AGATAACATAGACAAAAAGGAGGTCATAGACGACTTCACGCGCACGCTGACCAACGTTAT
AGACAAAAGCGAGGACTGTCGCGGTAAATGCGAATTGGTTTACTTCGACACCGATTCGGA
TAAGTGCCTGGCTGAAGTGCTGCTCGACAAGATACGTGCCATCGAACCGAACTTTGAGAA
CATCAGCAGGGAACGTGACTAAACATTGTGTCTGTTTGTTTGTCCGCGTGCCTGACACTG
CTATTATAAGTTGCTTTTGGATTTTTAAATTTTGTTCGCTTGGAACCATCAAACGTTGTA
GTTAACTCATTTCGTTGAACATTGATAGTTGGAGAATTCAGTTTTTATTCCGTCGAATTA
CTTAGTTTTTAATCAAAATGTATTTTTGTAATATCTACAAAAGTTGATTCTTGACAAGAA
CGGAAGTGACAAGACTGGTTTTGAGAATTAATTTAGGATAATTTTGGTAAATGTGTCAAT
TTATATTATTAGCAAATAGATACTTGGTATTTTTAGTTTTGTGTTCAAATGATTATTAAA
TGTGTGGACGAGCTCACAGC
(1340 bp)

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