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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13915_c0_seq2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
Transcript
Level		FPKM:0.86 TPM:0.93
ORF EntryO_BomoOtmSK11458_complete:A_BomoOtmSK_comp13915_c0_seq2
Sequence
(Nucleotide)
CGAATCTTTGTGTCTGTTGGTGGTTGTGTCTGTTCCTCACAAAATCGAGAAATTAAACAG
TGTTAAATAGTTTTCAAAGAGTAAAGTAATTTAAGTAGGTAGTGTTTTAATTAATCTGCG
AGTTAAGAGTAAATCATGGAGTAAAGTATGTAATTTAAGTAAATAAATCTCAAAATAAAT
TCTGTACCTACCAACATAAATAAATAAAAATAACTTTTAAACTTTACTAAAAACAATTAG
CTTAACATTCAAACAGTTTAAATTAGGGGAAACTATTTAAAAAAAAACAGACTTTAACTA
AGTGTAACTTTAAACAGTAAAATTAGTGTGCTAAATTTTAATACACTGAACACGAGAAAT
TCTAAAATATTTTGTGGGTGTATGTACTTGTTAATGTGACAAACTTATGGCGTCTTTATC
CTTGCCCCGTGTGCTTCAGCTGAAAAAGAACAGTCTGGATGCAGAACGAGAGCAGTTCGA
GAAGTCCCAGGTTTAACGAAACTCGCACGTAACTAATGCATGCTGACCGACCAACTCGAA
ACTAACACGCTATGGCGAATCCGAACGATAAACGCTTCTTCCAGCTGACACTAGCCATTC
AGAAGGCGATCAACACCAACGAGACACCGGTCAAAGAGAAACATGTCCGAAGCACGATCA
TCGGCACATTCAGAGAACAAAGCGCCATCACTTATTGGATGGTCGCCGTCCGACTTCCGA
TCCAGGATAATCGGATCGTGGCTTGGAAGTTCTGTCACGTGACCCATAAACTGCTGCGCG
AGGGTCACCCGGCGTGCCTTGACGATTCGCAGAGGCACATCTCCATGATCGAAAACCTCG
GCAAGCTCTGGGTGCATCTTCGTGAAGGCTACGGAAAGCTGGTGCATCTGTACTGCAATT
TGCTGGTGTGCAAGCTGAAGTTCCACGCGAGAAATCCTCGTTTCCCGGGGAACATGCAGC
TTACGGCCGACGAACTGGACGCGATCGCTGAGAACGACGTCAACAACTATTTCCAGTTAT
GCGTAGAGCTGTTCGATTACATGGATGAAATTCTAAATTTACAAGCAGCAGTGTTCGACA
GCCTGGGCAACGCTCGGGCCAACTCGATGACGGCGAGCGGCCAGTGCCGGCTGGCGGCTC
TCATTCCGTGCGCGCAGGACGCGTCGCAGCTGTACGACTGCAACGTGCGCCTGCTGTTCC
GGCTGCACGCCGCGCTGCCCGCCGACACGCTGCTCGGACACCGCGAGAGATTCAGGCAGC
AATTCAAAAAACTGAGCACGTTCTACAAGCACGCGAGTAGTCTCCAGTATTACAGGAATT
TGCTGACTCTGCCGGTGCTGCCATCTAATCCACCTAATTTTCTACTCCAGAGCGAGTTCG
GCACGTACGTGACGCCGGTGGTGTCGGTGCCGGAGCCGCCGCCGGACGAGCCGGACGCGG
TCGGCGCGCTCGTCGACACGTCCGACGCACTCAGCCAGTCCACATCGGATCAGTTCGAGG
AGTTTGAGAGTCGTCCGTCGGCGTCCCCGCAGCCCGACCCCGTCGTGGAGCGGGATCGGC
TCATCGACCATCTGCAGAACGAACTTAAAAGGATGAGGACCGAAGTATCACAATTGGTGC
AAGAAAGGAATTCAATGCTCGGCTCGATGAGGGAGCATTGTACACGTTTAGAAACTCAAC
TGCAGACCGCTAAAGCGGAGTTGGAAGATGAGAAACAGAGGGCCGTGGCTTTGTCTGCTG
AGACCCCAGAAATTAAACAGAAACTGGTTCAAACAGAGGAGATGGCTAAAACGATCGACG
AAAAGTTTCAGAAACTTAAAGGGGCGTACACACAACTACGGGAAGAACACATCGTTCTGA
TTAGAAAAAAAGCCGAAGTAGACAAAATGGCCGCCAATTTACGCGCCACAGCCGTTCAGC
ACGAAACCGCAAAAATGTCGTTACAGCAACAACTCAACGACAGAATGAAAGATGTTGAAT
TACTACAACAAAGTGCTTCGTCGAGTGAAGAGATTGAAGTGTACAAATCAGAAATAGCAA
ACCTTCGTAGCGAACTAGAACAATCTAGAGAAAAAGAGAATGAATTCCAAATCCTAAAAG
CTTCCATAGAAGCTCTAGAGATTGAACATAAAACTGTTAAAACTGAACAAGAAGACAAAA
TTCTGACGATATCGAATGAACTCAAAGAAGCTAAAGAAATTTTAGAAAAAGTAATACAAG
AAAAAAATGATAAAGATACTGAATTAATTAGAGTTAAAGAAGAATTGTTAGGATTGAGAG
AAAAGAGTGGAGATGAGTATAAAAAAGTAGTTGAAGAAAAAGAGGAAGCTCTTAAAAAAA
TCACCGAACTATCAGAAACTCATGCAAAGGAAAAAGAGGATTTGTTACAAAACAATTCCG
TACTAGAAGCGGACGTGGCGGCTTTGAAGCGGCAACTCGACGAGGCGCAAAGGGAACTAG
AGAAACAGCGTCTCGAAGCGGTAACGTGTGTCGGGGAGGCCGCTTTGGCACTGACGAACG
AAGCGTTAGCGGCCCTCGAGCGGGCCGACGCGCAGGAGTCGACCCGGCTCGCCTCGCAAC
TTGCCGTCGAAGCTTTCGAACAACTCGACAAATGTTCCGAGATCAAGGGCAACGAGGAAG
CGGTAATGAAATCCGCAATAAACGTGGCCCACAACACCGCGCAGCTCGCCGGCTACGTCA
CAGAGGTTTCCCATGTTTCCACCAGCTTGGAATTGTCGGATAAACTACAGAACGAATGCC
GCGCCATGCTGAGCTCGACGAGGGAGTGCCTGGAGGCGGTGCGGGGCGGGCGCGCGGCGG
GCACGCGCTGAGGGG
(2835 bp)

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